PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020676606.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 269aa MW: 30904.7 Da PI: 7.6769

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020676606.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	105.2	8.3e-33	55	195	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..... 79 lp+G++F+Ptd+el+ e+L+ kv+ + + + +i+ +i++++P++Lp v+++ +fF++ +k+y+tg+rk+r+++ XP_020676606.1 55 LPAGVKFDPTDQELL-EHLEGKVRPDLqklhplI---DkfipTIEGDnGICYTHPEKLP-GVTKDGLIRHFFHRPSKAYTTGNRKRRKVNtneqg 144 799**********.99997764554332...233223554446******.454555677**************74444655 PP NAM 80 .sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk++++++ +++++g kk+Lv+y g+ +k+ekt+Wvmh+y+l XP_020676606.1 145 gETRWHKTGKTRPIYA-NNKVKGHKKILVLYtnYGKLKKPEKTNWVMHQYHL 195 5778********.999*******6557999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MTWSSSCEED DGDEDHDRRF KDPSMPLSAM ICPSCGQKIQ VDNQASSGIQ NFPELPAGVK 60 FDPTDQELLE HLEGKVRPDL QKLHPLIDKF IPTIEGDNGI CYTHPEKLPG VTKDGLIRHF 120 FHRPSKAYTT GNRKRRKVNT NEQGGETRWH KTGKTRPIYA NNKVKGHKKI LVLYTNYGKL 180 KKPEKTNWVM HQYHLGSDEE EKDGELVVSK IFYQTQPRQC NSTALKDDFK DEKVIDCYNS 240 SLISYDNREH HRAEGSSHLM HNFGSPFLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28500.1	1e-109	NAC family protein