PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020675944.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 302aa    MW: 34475.9 Da    PI: 6.0505
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020675944.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.41.2e-52101381129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhP+deelv++yL kkv+++k+ +   + evd+++ ePw+Lp+++k +e+ewyfFs rd+kyatg r+nratk+gyWkatgkd+ ++++
  XP_020675944.1  10 LPPGFRFHPSDEELVCHYLYKKVNNHKIIE-GKMVEVDLHTREPWELPEMAKLSENEWYFFSFRDRKYATGLRTNRATKTGYWKATGKDRIIYHS 103
                     79*************************877.77***************8888899**************************************98 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129
                      ++++vg++ktLvfy+grap+g kt+Wvmhe+rle
  XP_020675944.1 104 kTHRVVGMRKTLVFYQGRAPNGMKTNWVMHEFRLE 138
                     66778***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MGLREIESSL PPGFRFHPSD EELVCHYLYK KVNNHKIIEG KMVEVDLHTR EPWELPEMAK  60
LSENEWYFFS FRDRKYATGL RTNRATKTGY WKATGKDRII YHSKTHRVVG MRKTLVFYQG  120
RAPNGMKTNW VMHEFRLENL HAPPKEDWVL CRVFHKRKGE PIRIGNGSIA EQENILSSGS  180
QLEISTDDQM EQLANAPDGI HGDMGSSIPL VPYQEGNSSN TYLNFAVLQY NFFDFPQEMM  240
MGNSDVIGME SRHASGDEFG FLLDMGLDDF VHESGEGGGA KLMSNVEAGL RCHDGKDEVV  300
SF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.12e-77NAC family protein