PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020675901.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 313aa MW: 36624.1 Da PI: 6.6752 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 178.1 | 2.4e-55 | 8 | 136 | 2 | 129 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 ppGfrFhPtdeelv++yL+kkv+++++++ +vik+vd+yk+ePwdL++k+k e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+++ XP_020675901.1 8 PPGFRFHPTDEELVDYYLRKKVASRRNDI-DVIKDVDLYKIEPWDLQEKCKIgieEQNEWYFFSHKDKKYPTGTRTNRATIAGFWKATGRDKPIY 101 9***************************9.99**************964333333566************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrle 129 s k++lvg++ktLvfykgrap+g+k dW+mheyrle XP_020675901.1 102 S-KNNLVGMRKTLVFYKGRAPNGQKLDWIMHEYRLE 136 *.899*****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 313 aa Download sequence |
MTTFSHIPPG FRFHPTDEEL VDYYLRKKVA SRRNDIDVIK DVDLYKIEPW DLQEKCKIGI 60 EEQNEWYFFS HKDKKYPTGT RTNRATIAGF WKATGRDKPI YSKNNLVGMR KTLVFYKGRA 120 PNGQKLDWIM HEYRLETNEN GPPQEEGWVV CRVFKKKATS TETLINHDSS SYHWYDENLP 180 FLPQFDSTKK LTCQHSEISH QPSPYFNCKP DLELVSHHHL PQDHTFLNLP HLESPKLPHF 240 INHETLQNNQ QLQIVTDWRV FDKFVASQLS QEDVSKESDF CNAGKVFEVA DKEIAVAECA 300 STSTSSEQID LWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12260.1 | 1e-123 | NAC family protein |