PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020675835.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 470aa MW: 52072.1 Da PI: 4.9871

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020675835.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.5	1.1e-31	252	307	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_020675835.1 252 KARRCWSPDLHRRFVNALQILGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 307 68****************************************************97 PP
2	Myb_DNA-binding	39.7	1.1e-12	254	305	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a + lGg t+k I + m g+t ++ks++qky+ XP_020675835.1 254 RRCWSPDLHRRFVNALQILGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 305 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MLYMADFPSE LSLDYNPTTY SMNQDQKSYG EQAEQMQKLQ ELLVRLEDER LKIDAFKREL 60 PLCMQLLNNA MEAYKRQLET YQTNQGPRLV LEEFIPLNKN LNIQESEKPS SSEKASWMVS 120 AQLWSTEAGK QQTMPSTTPL KETIENSFII SSKQALEAKP RCGGAFHPFC KDKRKNLPPT 180 STSCSSTARI LPELALASAD DEMEEKKSSE NGNGERNGRR EGCSKSGGSD LPHNKGGGSS 240 APGEGSPTTQ RKARRCWSPD LHRRFVNALQ ILGGSQVATP KQIRELMKVD GLTNDEVKSH 300 LQKYRLHTRR PMPAPTVAPT APQLLVLGGI WVPPEYATSA AAAAGPTLYG AHPVPAHYCS 360 SSQVPQDYYQ VPTPPALVAA AAAQFHGHLP PLHRVGGANL YKGCQVSPES DHRSDGERSE 420 SIEEEQEGQE REEEEEEEDE EEANDKNVEE KELVVLGEAK PQDNDALLNF

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MLYMADFPSE LSLDYNPTTY SMNQDQKSYG EQAEQMQKLQ ELLVRLEDER LKIDAFKREL  60
PLCMQLLNNA MEAYKRQLET YQTNQGPRLV LEEFIPLNKN LNIQESEKPS SSEKASWMVS  120
AQLWSTEAGK QQTMPSTTPL KETIENSFII SSKQALEAKP RCGGAFHPFC KDKRKNLPPT  180
STSCSSTARI LPELALASAD DEMEEKKSSE NGNGERNGRR EGCSKSGGSD LPHNKGGGSS  240
APGEGSPTTQ RKARRCWSPD LHRRFVNALQ ILGGSQVATP KQIRELMKVD GLTNDEVKSH  300
LQKYRLHTRR PMPAPTVAPT APQLLVLGGI WVPPEYATSA AAAAGPTLYG AHPVPAHYCS  360
SSQVPQDYYQ VPTPPALVAA AAAQFHGHLP PLHRVGGANL YKGCQVSPES DHRSDGERSE  420
SIEEEQEGQE REEEEEEEDE EEANDKNVEE KELVVLGEAK PQDNDALLNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	5e-81	G2-like family protein