PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020675760.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | GRF | ||||||||
Protein Properties | Length: 257aa MW: 28689.9 Da PI: 8.683 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 68.6 | 8e-22 | 90 | 133 | 2 | 45 |
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 epgrCrRtDGKkWRCsr + +++k+CErHlhrg++r rk+k++ XP_020675760.1 90 LEPGRCRRTDGKKWRCSRVACPDSKYCERHLHRGKNRLRKHKDA 133 69***************************************997 PP | |||||||
2 | QLQ | 43.6 | 9e-16 | 22 | 56 | 2 | 36 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FT++Q+q+L+ Q+ + ++a ++P+P +Ll+ ++ XP_020675760.1 22 PFTPSQWQELEEQAIMFNCMAVGLPIPTHLLLSLR 56 9******************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MMMMMEVGRG NGNVITGKSF CPFTPSQWQE LEEQAIMFNC MAVGLPIPTH LLLSLRRSRY 60 SQPKPGFFPP YSPLGWGCFQ LGSSGRAEDL EPGRCRRTDG KKWRCSRVAC PDSKYCERHL 120 HRGKNRLRKH KDASLQHESS AASVLPCSPL SLLPPISKSK DTACKEPRYF HGTSGLIFHH 180 CSVLGSDLRL ERPVESEKGG NHKPISLHCF FDERPEKIAE DDGARSSQCK SLKRAEDLTS 240 SGSVIPEPLP VLLDLNV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 1e-35 | GRF family protein |