PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020675387.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | Trihelix | ||||||||
Protein Properties | Length: 223aa MW: 24967.8 Da PI: 4.7677 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 86.2 | 3.9e-27 | 23 | 109 | 1 | 84 |
trihelix 1 rWtkqevlaLiearremeerlr.....rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 rWt+qe+l+Li+++r +e+r r ++++++p+W++vs ++r++g++r+++qC+++w+nl+++ykkike+e++r+ + + f XP_020675387.1 23 RWTRQEILVLIQGKRVVESRGRgrastSAAAAEPKWAAVSTYCRRHGVNRGAVQCRKRWSNLAGDYKKIKEWEIRREMRGE--PESFWA 109 8*******************995433224699******************************************9953322..333333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MEIAALTSAA NGGEACRPPR LPRWTRQEIL VLIQGKRVVE SRGRGRASTS AAAAEPKWAA 60 VSTYCRRHGV NRGAVQCRKR WSNLAGDYKK IKEWEIRREM RGEPESFWAM RNDLRRERKL 120 PGFFDREVYD ILDGVSPAAA SSAARAAPAV EEEGDVEEVV FDSGRSAADD GLFSDFEEEK 180 EAEEGDESEM ERPTPPVEVV PISEKKLELV QEEESTPGYA LFH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 2e-55 | Trihelix family protein |