PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020675371.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 293aa    MW: 33256.2 Da    PI: 6.5935
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020675371.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY83.91.6e-26122183159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDg++WrKYGqK++ g++fpr YYrCt++   gC ++k+++rs+++ ++++itY+g H+++
  XP_020675371.2 122 LDDGHSWRKYGQKDILGAKFPRCYYRCTYRhshGCVATKQIQRSDNNSSLFDITYRGAHTCN 183
                     59**************************998899**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MEKSHSEDLK MLIDVLREGN GHVMELEAHL YNYETFSSET CLLLSSKLQS TFATAIAIIK  60
LMEQRGLPSP PPSSATDSPR SQSSERSFKE QERREMCKKR KSLPRWSEQV KACSGSAMEI  120
PLDDGHSWRK YGQKDILGAK FPRCYYRCTY RHSHGCVATK QIQRSDNNSS LFDITYRGAH  180
TCNHGFQKPS PLTNEQIIHQ NQSIKVKTEA LSSNEQKSES SPYFSFPLTP KSCLKLESNV  240
FSSSSNPENY EGLDLEIADI ICASNSTTSS EMLKIDFGVE QFVFDSEFSF DFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.24e-42WRKY family protein