PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020675228.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | GATA | ||||||||
Protein Properties | Length: 276aa MW: 29739.7 Da PI: 7.1298 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 45 | 1.4e-14 | 181 | 217 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nCg + Tp +Rrgp g+++LCnaCGl+++ kg+ XP_020675228.1 181 CQNCGISAklTPAMRRGPGGPRSLCNACGLMWANKGT 217 *****9999*************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence |
MSAPFGADLP NHGGDARAQM VEGAPADQEG EQEAADAAMQ LVSSNPNQLT LLFQGEVYVF 60 DSVTPEKVQA VLLLLGGCEV PTCVSGSALV CNQDDRGMDD ILRRTNIPAK RLASLIRFRE 120 KRKERCFDKK IRYDVRKEVA LRMKRRKGQF AGKANPDDEA SPSLSCDQAS SQDDTPRETN 180 CQNCGISAKL TPAMRRGPGG PRSLCNACGL MWANKGTLRS VSQSPKMTTL ALPSPNGMVP 240 ASSESRIDVK PPIISNNHGS AEILTQEAQA EVQPGE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 2e-66 | GATA family protein |