PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020674948.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 118aa MW: 13687.4 Da PI: 7.2495 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 50.3 | 4.6e-16 | 35 | 87 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 +D y+W+KYGqK +++ + rC ++C+++kkve ++p+ ++i Yeg+Hn XP_020674948.1 35 EDDYKWKKYGQKYIRSMQKN----RCVNKNCKTRKKVELPPNEPNNIDIAYEGDHNY 87 79*************99987....6******************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 118 aa Download sequence |
MESMASSKTT IIDEEQVQEQ NIVVAFSNGL FVIPEDDYKW KKYGQKYIRS MQKNRCVNKN 60 CKTRKKVELP PNEPNNIDIA YEGDHNYRAL VGRSENEEAR IAANQYDLAT QMFGYART |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23320.1 | 3e-11 | WRKY family protein |