PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020674944.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NF-YB | ||||||||
Protein Properties | Length: 163aa MW: 18214.4 Da PI: 5.812 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 39.4 | 1.5e-12 | 60 | 126 | 28 | 94 |
NF-YB 28 skdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 kda e + fi ++++ a+d c++ +r+tin++d++ al ++ f ++++pl+ l+++r+ + XP_020674944.1 60 HKDALIAFSESARIFIHYLSATANDICKESRRQTINAEDVFKALDDMEFTEFIQPLRDSLEEFRKKN 126 57788888999999**************************************************876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MAKGEAWDGT AATPATSTVV EELPKTIVRR VVKEKLFQLS SASSKKAKSG EVGDEEMMLH 60 KDALIAFSES ARIFIHYLSA TANDICKESR RQTINAEDVF KALDDMEFTE FIQPLRDSLE 120 EFRKKNAGRK SGTKGNGGTK KRKSEEELPH KDENEGNAYE ENN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 123 | 143 | RKKNAGRKSGTKGNGGTKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27470.1 | 1e-37 | NF-YB family protein |