PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020674926.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GRAS
Protein Properties Length: 429aa    MW: 48029 Da    PI: 6.3273
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020674926.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS427.97.9e-131494241374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lLl+cA++v++g+ ++a+++L+++s l+spdgd+mqR+a+yfteALa+rl+rs+++ly+al+p   ++   + + + ++lf++++P+l++s+
  XP_020674926.1  49 LIHLLLNCATHVAAGNIAQANTFLEHISLLSSPDGDNMQRIASYFTEALATRLLRSWPGLYRALNPILPES--AAASNHGRRLFVDLFPFLRLSF 141
                     689*************************************************************9998874..667778999************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     l+ NqaIlea+ege+ vH+iD++ s + +W+a+lqa + Rpegpp+lRiT+vg+    +++ l +t+  L++ Ae+l++pf+f++ v+++le l+
  XP_020674926.1 142 LISNQAILEAMEGEKVVHVIDLGGSDPSHWLAFLQAVSGRPEGPPHLRITTVGE----DRDFLAQTALVLTEEAEKLDIPFQFHA-VVSQLEGLN 231
                     ******************************************************....9**************************.799****** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsles.........erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                     +e+L+vk+gEala+ +vl+lh+ll+++ +++          +++++L  +++lsPk++vv+eqe++hn++++ erf+eal++y+alfd+le ++p
  XP_020674926.1 232 IESLHVKTGEALAITSVLKLHSLLASDEATATprqlfspiaKIESFLASLRGLSPKLMVVTEQESNHNGANLNERFMEALNFYAALFDCLELSVP 326
                     ************************777666654455556667899************************************************** PP

            GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                     r+s er kvE+ ++++ei+n++aceg er+erhe+l kW +rle+aGF+ v+ls++   qa+++l+ ++ +gy+v+ee+g+++++W++r+L+s+S
  XP_020674926.1 327 RQSAERLKVEKLVFREEIKNIIACEGLERKERHEKLDKWMRRLEMAGFGRVSLSYNGLVQARRMLQGFGCEGYKVKEENGCFLFCWQERALFSIS 421
                     *********************************************************************************************** PP

            GRAS 372 aWr 374
                     aWr
  XP_020674926.1 422 AWR 424
                     **8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    
MAETADELSS SSATSSHLLS LMSMSPTTIT SPYAPFFRNL NADERGLFLI HLLLNCATHV  60
AAGNIAQANT FLEHISLLSS PDGDNMQRIA SYFTEALATR LLRSWPGLYR ALNPILPESA  120
AASNHGRRLF VDLFPFLRLS FLISNQAILE AMEGEKVVHV IDLGGSDPSH WLAFLQAVSG  180
RPEGPPHLRI TTVGEDRDFL AQTALVLTEE AEKLDIPFQF HAVVSQLEGL NIESLHVKTG  240
EALAITSVLK LHSLLASDEA TATPRQLFSP IAKIESFLAS LRGLSPKLMV VTEQESNHNG  300
ANLNERFMEA LNFYAALFDC LELSVPRQSA ERLKVEKLVF REEIKNIIAC EGLERKERHE  360
KLDKWMRRLE MAGFGRVSLS YNGLVQARRM LQGFGCEGYK VKEENGCFLF CWQERALFSI  420
SAWRFRRYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.11e-172GRAS family protein