PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020674926.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | GRAS | ||||||||
Protein Properties | Length: 429aa MW: 48029 Da PI: 6.3273 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 427.9 | 7.9e-131 | 49 | 424 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l++lLl+cA++v++g+ ++a+++L+++s l+spdgd+mqR+a+yfteALa+rl+rs+++ly+al+p ++ + + + ++lf++++P+l++s+ XP_020674926.1 49 LIHLLLNCATHVAAGNIAQANTFLEHISLLSSPDGDNMQRIASYFTEALATRLLRSWPGLYRALNPILPES--AAASNHGRRLFVDLFPFLRLSF 141 689*************************************************************9998874..667778999************* PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190 l+ NqaIlea+ege+ vH+iD++ s + +W+a+lqa + Rpegpp+lRiT+vg+ +++ l +t+ L++ Ae+l++pf+f++ v+++le l+ XP_020674926.1 142 LISNQAILEAMEGEKVVHVIDLGGSDPSHWLAFLQAVSGRPEGPPHLRITTVGE----DRDFLAQTALVLTEEAEKLDIPFQFHA-VVSQLEGLN 231 ******************************************************....9**************************.799****** PP GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsles.........erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276 +e+L+vk+gEala+ +vl+lh+ll+++ +++ +++++L +++lsPk++vv+eqe++hn++++ erf+eal++y+alfd+le ++p XP_020674926.1 232 IESLHVKTGEALAITSVLKLHSLLASDEATATprqlfspiaKIESFLASLRGLSPKLMVVTEQESNHNGANLNERFMEALNFYAALFDCLELSVP 326 ************************777666654455556667899************************************************** PP GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371 r+s er kvE+ ++++ei+n++aceg er+erhe+l kW +rle+aGF+ v+ls++ qa+++l+ ++ +gy+v+ee+g+++++W++r+L+s+S XP_020674926.1 327 RQSAERLKVEKLVFREEIKNIIACEGLERKERHEKLDKWMRRLEMAGFGRVSLSYNGLVQARRMLQGFGCEGYKVKEENGCFLFCWQERALFSIS 421 *********************************************************************************************** PP GRAS 372 aWr 374 aWr XP_020674926.1 422 AWR 424 **8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 429 aa Download sequence |
MAETADELSS SSATSSHLLS LMSMSPTTIT SPYAPFFRNL NADERGLFLI HLLLNCATHV 60 AAGNIAQANT FLEHISLLSS PDGDNMQRIA SYFTEALATR LLRSWPGLYR ALNPILPESA 120 AASNHGRRLF VDLFPFLRLS FLISNQAILE AMEGEKVVHV IDLGGSDPSH WLAFLQAVSG 180 RPEGPPHLRI TTVGEDRDFL AQTALVLTEE AEKLDIPFQF HAVVSQLEGL NIESLHVKTG 240 EALAITSVLK LHSLLASDEA TATPRQLFSP IAKIESFLAS LRGLSPKLMV VTEQESNHNG 300 ANLNERFMEA LNFYAALFDC LELSVPRQSA ERLKVEKLVF REEIKNIIAC EGLERKERHE 360 KLDKWMRRLE MAGFGRVSLS YNGLVQARRM LQGFGCEGYK VKEENGCFLF CWQERALFSI 420 SAWRFRRYD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50420.1 | 1e-172 | GRAS family protein |