PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020674895.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 121aa MW: 14084.8 Da PI: 7.2474 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 62.5 | 7.3e-20 | 35 | 90 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 +D y+W+KYGqK +++ + sY+rC ++C+++kkve ++p+ ++i Yeg+Hn XP_020674895.1 35 EDDYKWKKYGQKYIRSMQ-KNSYFRCVNKNCKTRKKVELPPNEPNNIDIAYEGDHNY 90 79************9765.68**********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence |
MESMASSKTT IIDEEQVQEQ NIVVAFSNGL FVIPEDDYKW KKYGQKYIRS MQKNSYFRCV 60 NKNCKTRKKV ELPPNEPNNI DIAYEGDHNY RALVGRSENE EARIAANQYD LATQMFGYAR 120 T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03340.1 | 2e-14 | WRKY family protein |