PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020674518.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 240aa MW: 26225.9 Da PI: 10.1966 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.8 | 3.1e-19 | 105 | 155 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp +ng +r++lg+f tae+Aa a+++a+ +++g XP_020674518.1 105 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEQAAVAYDRAAYRMRG 155 8********.***********9987..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MFGSLELEPI RHHLLDVKEL PSSAAISPPP PMYRRSLSFG SIVADHWSDL PFHVDDSDDM 60 VVYLTLHDAF NHGWLPDGCK TTSIKPDPPS PPPPAPANFS SKRKHYRGVR QRPWGKFAAE 120 IRDPAKNGAR VWLGTFETAE QAAVAYDRAA YRMRGSRALL NFPLRICPDG VSSLAKRASP 180 ELSASLSSTP ISQSKVSPKR TKRVEASEGR SPSLPAALSS FPSTVPALVQ LQLPAQALAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 3e-49 | ERF family protein |