PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020674510.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 273aa    MW: 30499.5 Da    PI: 5.0867
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020674510.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.1e-20119169255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+ +g   r++lg+f+ta eAa+a+++a+ +++g
  XP_020674510.1 119 RYRGVRQRP-WGKFAAEIRDPKRRG--SRVWLGTFDTAVEAARAYDRAAFRMRG 169
                     7********.**********96554..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MAKQAISALD LIREHLFGDA VDTLTGLESP KPQLPVVSAE VNPIPGDLSI SDYLQDTDAD  60
PLGTGFRFQE PAQTMIRFGG DRFEFGLKVN VPHAAAPKVE WIHGAVDENR APEMCDGNRY  120
RGVRQRPWGK FAAEIRDPKR RGSRVWLGTF DTAVEAARAY DRAAFRMRGS KAILNFPNEV  180
GCSADWVQPP AQAVAHPVPP EKRGRQEMEE EDRVVKKERL EEYEWNFPSE EPLTPSIWSA  240
VWDGTDAKGF FSLPPLSPLS PHPQLSFPPL MVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.11e-29ERF family protein