PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020674495.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 291aa MW: 32097.5 Da PI: 7.9727 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.1 | 3.6e-19 | 119 | 173 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Lee F++n++++ +++ LA+kl+L rqV vWFqNrRa+ k XP_020674495.1 119 RKKLRLSKDQAAILEESFKENNTLNPKQKLALANKLNLRPRQVEVWFQNRRARTK 173 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 124.3 | 5.8e-40 | 119 | 207 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rlsk+q+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk ++++l+een+rL+kev+eLr + XP_020674495.1 119 RKKLRLSKDQAAILEESFKENNTLNPKQKLALANKLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKLCCENLTEENRRLQKEVQELR-S 207 69*************************************************************************************9.4 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence |
MLIDKDQDLG LSLGLSSSEA GCSLQLNLMP SSSPPPTALC LTQSEQRTVL ASQGIDVNRA 60 PMAEIEIEED AGASSPNSTV STENYGGKRR YYAGGGEEID GDRACSRGVS DEEDGDGSRK 120 KLRLSKDQAA ILEESFKENN TLNPKQKLAL ANKLNLRPRQ VEVWFQNRRA RTKLKQTEVD 180 CEFLKLCCEN LTEENRRLQK EVQELRSLKL SPPFFMHMTP PTTLTMCPSC ERIAVSNSTA 240 PPPPPPAKLP RSDMHQLFPR PVRPPVAAIP GWAPIVLRSS FLNATAKPQR S |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 118 | 124 | SRKKLRL |
2 | 168 | 176 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16780.1 | 1e-55 | HD-ZIP family protein |