PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020674479.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 273aa    MW: 30323.3 Da    PI: 4.8738
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020674479.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.5e-20119169255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+ +g   r++lg+f+ta eAa+a+++a+ k++g
  XP_020674479.1 119 RYRGVRQRP-WGKFAAEIRDPKRRG--SRVWLGTFDTAVEAARAYDRAAFKMRG 169
                     7********.**********96554..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MASQDISNLV IIREHLFGDA ADILTGLESP AQTTSLTEAE ITPIPGDLSI SDYLEDPDTV  60
PRGTGFRFQE PAQTMIRFGG DRLEVGLKLS VPHTAAPKVE WIDGSVDDNR APEMLDGNRY  120
RGVRQRPWGK FAAEIRDPKR RGSRVWLGTF DTAVEAARAY DRAAFKMRGS KAILNFPNEV  180
GSSADWVHPP PSAAALPMQP EKRGREIEKE EQRVVKKERL EESEWNILAE EPLTPSIWSA  240
VWDGTDAKGF FSLPPLSPLS PHPQLGFPQL MVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.17e-30ERF family protein