PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020674356.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 125aa MW: 14127.5 Da PI: 4.3622 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 30.2 | 8.9e-10 | 105 | 125 | 1 | 21 |
---SS-EEEEEEE--TT-SS- CS WRKY 1 ldDgynWrKYGqKevkgsefp 21 ldDg++WrKYG+K vk+s++p XP_020674356.1 105 LDDGFRWRKYGKKAVKNSPNP 125 59*****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 125 aa Download sequence |
MAALLEFIDQ FTNFSSFHFP EFYSDGQPEL DVYDYAEAED AHLFDESCLT FTGETEAVAA 60 AAAVVSTGKD GGEQRNGQEN DEVKRRKVEA EFRIGFRTKS EVEILDDGFR WRKYGKKAVK 120 NSPNP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 84 | 120 | KRRKVEAEFRIGFRTKSEVEILDDGFRWRKYGKKAVK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26170.1 | 5e-15 | WRKY family protein |