PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020673950.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 302aa MW: 33259.8 Da PI: 8.6559 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.5 | 1.5e-29 | 156 | 215 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ ++++ pr+Y+rC++a +Cpvkkkv+rsa+d ++++ tYegeHnh+ XP_020673950.1 156 VKDGYHWRKYGQKVTRDNPSPRAYFRCSFApSCPVKKKVQRSANDLSILVATYEGEHNHK 215 58***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
MEPATCLGFS TLNLELSVGP ADLTEKGLAS KTPPDRQQES MFMKEKLSKI MEDNRKLNEM 60 LSDMSTNYCS LQNKFFDFMN SSPSEKAAGM ASPPTGKRKS DSLESYSHEN VNNGVKAHVE 120 SLPIEFDSCK RLRMDSKSSV SKICVRADPS ETSLVVKDGY HWRKYGQKVT RDNPSPRAYF 180 RCSFAPSCPV KKKVQRSAND LSILVATYEG EHNHKAPLQS EGSGRLSHVG SSITPSLSIN 240 SSSPTIMVDL TNDKLHAEAK KACGEMASTE IQKFMIEQMA AAIAKDPTFR ATLANVISGR 300 IF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 7e-59 | WRKY family protein |