PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020673826.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 333aa MW: 37889.1 Da PI: 9.6734 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61 | 1.9e-19 | 127 | 180 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++ft++q++ Le +Fe++ ++ +++++LAk+lgL+ rqV +WFqN+Ra++k XP_020673826.1 127 KKRRFTETQVKSLEVMFEEQAKLEPRKKQQLAKELGLQPRQVAIWFQNKRARWK 180 5669*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 114.7 | 5.6e-37 | 126 | 218 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrr+++ qvk+LE +Fee+ kLep++K++la+eLglqprqva+WFqn+RAR+k+kqlE+ y+aL + ydal+++ e+L ++++ L ++++ XP_020673826.1 126 EKKRRFTETQVKSLEVMFEEQAKLEPRKKQQLAKELGLQPRQVAIWFQNKRARWKSKQLERAYAALSADYDALRSSFESLLHQKNVLSVQVQR 218 69*************************************************************************************999875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MRNKMLSNSY VESIERQLAK PRRASPSRQL PRPPFLHWLS TLLPPFRQLI YISRQTTPAK 60 AFLNLPTLSL PVFHECWLQM MMDSNAVGNL IDIMMLSSSN SSSSGCENDA AASAAAAAAA 120 AELAVEKKRR FTETQVKSLE VMFEEQAKLE PRKKQQLAKE LGLQPRQVAI WFQNKRARWK 180 SKQLERAYAA LSADYDALRS SFESLLHQKN VLSVQVQRLA EMVESNNQRE KKESSKQIDF 240 TVTRSEAEKT PILSLSSNKN NYDVERKVNH LSVGKEVEHH LHKTKEQAGG GRILVSDDST 300 EQKQFCFHST GWPSDQLMNG GGCSQWWEFL SYE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.1 | 2e-31 | HD-ZIP family protein |