PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020673480.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 142aa MW: 15996 Da PI: 5.0449 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.4 | 8.4e-19 | 6 | 53 | 2 | 53 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 +y+GVr+++ +g+Wv+eIr+p +r++lg+f tae+Aa+a+++a++ + XP_020673480.1 6 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAARAYDEAARLM 53 69******9.**********8.....334*********************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
MPKLLRYRGV RQRHWGSWVS EIRHPLLKTR IWLGTFETAE DAARAYDEAA RLMCGSNART 60 NFPPNSNSAS ALSPSLVAKL ERCCITSQEE MRRAKVEMEG EGEVCMDEEF IEEMIEELRY 120 NGSVEISSSS CSSSSASLFP NP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25190.1 | 5e-25 | ERF family protein |