PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020673440.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NF-YC | ||||||||
Protein Properties | Length: 113aa MW: 12740 Da PI: 9.8908 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 104.1 | 9e-33 | 19 | 100 | 19 | 99 |
NF-YC 19 helPlarikkilka.dedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 ++lPl+rikki+k+ edvkmis+eaP +++kacelfi +lt+rs+ + ++k+rtl+k di +av+ t++fdflv++v + XP_020673440.2 19 NSLPLSRIKKIMKQsGEDVKMISCEAPLVFAKACELFIQQLTVRSYKVSVQAKKRTLQKDDIVTAVKATEVFDFLVEMVTAS 100 589*********96269************************************************************99865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 113 aa Download sequence |
MRQAGIYSGM MWGKKPCPNS LPLSRIKKIM KQSGEDVKMI SCEAPLVFAK ACELFIQQLT 60 VRSYKVSVQA KKRTLQKDDI VTAVKATEVF DFLVEMVTAS NADDCMKTTR ERT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 8e-31 | NF-YC family protein |