PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020673363.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 199aa MW: 21704.6 Da PI: 9.7232 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.1 | 1.1e-18 | 29 | 77 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr ++ +gr++AeIrdp + ++r++lg+f++ae+Aa+a++ a+++l+g XP_020673363.1 29 FRGVRKRP-WGRFAAEIRDPLK---KTRVWLGTFDSAEDAARAYDVAARELRG 77 8*******.**********743...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MMRKGRTLAA GEAHLTDAPP QPPPKEIRFR GVRKRPWGRF AAEIRDPLKK TRVWLGTFDS 60 AEDAARAYDV AARELRGCKA KTNFPPLIAG GIHVDAQFFP NPAPTPPRPT SSSLSSTVES 120 FSGPRLSIPR PPSIHIRPPA NQAPLRVLTG DEDCHSDCGS SSSVVDNGDV ASEYRKPLPF 180 DLNLLPPPND DLQSTVLRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 2e-23 | ERF family protein |