PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020673344.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 344aa    MW: 38910.4 Da    PI: 4.5995
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020673344.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.13.4e-2199148255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++G+r+++ +g+W+AeIrdp++     r++lg+f+t+eeAa+a++aa++k++g
  XP_020673344.1  99 QFRGIRQRP-WGKWAAEIRDPRK---GERVWLGTFDTPEEAARAYDAAARKIRG 148
                     69*******.**********954...3*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MCGGAIISDF IPTPSLRSRR VTAHNLWPDL RKNTKGGRKI RAAEFVDDFE ADFEEFEGEP  60
EEDEVEKLIE VRPGAFRTKA ATFSRGAADK PATRKRKNQF RGIRQRPWGK WAAEIRDPRK  120
GERVWLGTFD TPEEAARAYD AAARKIRGKK AKVNFPEVVL EPAQNQLNKL SSTKAVKPNT  180
SDEFNFNDSF GYWNNENYNI YSSLGLGEEP LKLESAILNF HSEQESNSLN CSEFGWEHET  240
NYPEITSVPP TIAEDIKSEF MEETAPLKKL KNNSCEAVST DQAAAMKLSE ELLAFEPDMK  300
FMPFAEGNSD LSFDSLLGSE MTQDGINFME LWSFEDMPIS GDVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.31e-44ERF family protein