PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020673301.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 300aa    MW: 34210.6 Da    PI: 5.1545
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020673301.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.73.9e-52131401128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeelvv+yL++k++ ++l++  +i+evd+yk++Pw+Lp+k+  ++kewyfF++rd+ky++g+r+nra+ +gyWkatg dk+vl k
  XP_020673301.1  13 LPPGFRFHPTDEELVVHYLCRKAAYQRLPV-PIIAEVDLYKFDPWELPEKALFGQKEWYFFTPRDRKYPNGSRPNRAAGQGYWKATGADKPVLPK 106
                     79****************************.88***************8888899**************************************98 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++  g+kk Lvfy+g+ap+g ktdW+mheyrl
  XP_020673301.1 107 gVSRPLGIKKALVFYSGKAPRGAKTDWIMHEYRL 140
                     66677***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MGRARDAEAE LNLPPGFRFH PTDEELVVHY LCRKAAYQRL PVPIIAEVDL YKFDPWELPE  60
KALFGQKEWY FFTPRDRKYP NGSRPNRAAG QGYWKATGAD KPVLPKGVSR PLGIKKALVF  120
YSGKAPRGAK TDWIMHEYRL AETNRSANKK GSLRLDDWVL CRLYNKKNAW EKKMQQNIKE  180
SPSFEETMDS MEAVEDTGSE SFRTPESDVD DSLPEFNDLG MPGLRTSCGN ALSFKGMEQR  240
PKEEDNDWFL DLNLDELDAL GTESATMTLG TFDSSLNQDF FYQALCSPQL KPSLTNLPPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-91NAC family protein