PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020673087.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 331aa MW: 37661.4 Da PI: 9.2574

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020673087.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.3	2.5e-52	8	135	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+ +yL+k++ ++++ ++i++vdiyk++PwdLp+k++ +++ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+++ + XP_020673087.1 8 LPPGFRFHPTDEELILHYLRKRLGPSPCPS-SIIADVDIYKFNPWDLPEKATFGDREWYFFSPRDRKYPNGIRPNRAAASGYWKATGTDKPITMS 101 79************************99.89***********998999**********************************987 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++e +g+kk Lvfy g+ pkg+kt+W+mhey+l XP_020673087.1 102 kGNESIGVKKALVFYMGKPPKGVKTNWIMHEYKL 135 57788*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MSNGSPSLPP GFRFHPTDEE LILHYLRKRL GPSPCPSSII ADVDIYKFNP WDLPEKATFG 60 DREWYFFSPR DRKYPNGIRP NRAAASGYWK ATGTDKPITM SKGNESIGVK KALVFYMGKP 120 PKGVKTNWIM HEYKLVESLN KSKRRPAKHK EDSMKLDDWV LCRIYQKTNY HSSVDQEQEN 180 SAGEKASLQK SIINSKIHKS FSLSELLIEE TDFSLLSRLL DTPSSTPVLG QAPFSNANFS 240 QHSTENISNT SSSYLTSQAI ESESSALVSE NSLKRQRMTG NFEVDEFGGY LNPSKRINTY 300 SQIYDQLINQ FDISQTFFYQ HLMLNSQLGK P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	3e-91	NAC family protein