PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020672781.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 205aa MW: 22653.3 Da PI: 8.5048 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.2 | 1.1e-19 | 95 | 143 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+W+AeIrdp+ r r +lg+f taeeAa+a+++a+ +++g XP_020672781.1 95 YRGVRRRP-WGKWAAEIRDPR----RaVRKWLGTFNTAEEAARAYDNAAIEFRG 143 9*******.**********82....48************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MKPNQEFFFQ SSPDNVSLMD SNNPPSVHRP LTAEEENAAI VAALTHVISG HPDNTVPLSL 60 SHISIPVKLP ATTVVAAREE QGKGGPSRRK KGNNYRGVRR RPWGKWAAEI RDPRRAVRKW 120 LGTFNTAEEA ARAYDNAAIE FRGRRAKLNF PFTDWDTSSS SGRRETGMTS PTAVSQNEEI 180 GGLWEGLQDL IELDGEVSTD RCGLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 3e-24 | ERF family protein |