PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020672383.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 424aa MW: 47334.7 Da PI: 7.1128 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 113 | 3.2e-35 | 34 | 177 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........t 78 lp+G++F+Ptd+el+ e+L++kv+ ++ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ XP_020672383.1 34 LPAGVKFDPTDQELI-EHLEAKVSCQSsmrshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSKHFFHRPSKAYTTGTRKRRKiqtevdvqR 126 799************.99******99977765543333333766646**********.555666799******************7566655433 PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_020672383.1 127 GETRWHKTGKTRPVTA-NGKQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 177 3778************.999***********5547999999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 424 aa Download sequence |
MSRSNIEEHQ IMSGSKQCPS CGHKLDRKPD WLGLPAGVKF DPTDQELIEH LEAKVSCQSS 60 MRSHPLIDEF IPTIEGEDGI CYTHPEKLPG VTRDGLSKHF FHRPSKAYTT GTRKRRKIQT 120 EVDVQRGETR WHKTGKTRPV TANGKQKGCK KILVLYTNFG KHRKPEKTNW VMHQYHLGEL 180 EEEKEGELVV SKIFYQTQPR QCSWSSERSG AGGKDSGNGS GSCSSTKEVV SEKREELGSV 240 AAVAAAAAAV AGMAVYSTGM EQLQQTDSFS FAPFRKSFDE VGIGEAAATH STEGSMGREE 300 REEREHHHHQ RHQSAAVVAA AASAFDISRP SNPISAILHQ NTMVLDDPYH VSRILLQDKF 360 EQQQQQRQQQ QQKLAERSAG AGLEDLIMGC TSTDIKAETS ISQPQETEWL KYSYWSPDSH 420 DHHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29230.1 | 1e-114 | NAC family protein |