PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020672256.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 117aa MW: 13244.5 Da PI: 5.066 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.1 | 6.1e-20 | 11 | 62 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr+++ +g+++AeIrd s + +r++lg+f taeeAa+a+++a+ +++g XP_020672256.1 11 TRYRGVRRRP-WGKFAAEIRDSSR---HgARVWLGTFSTAEEAARAYDRAAYSMRG 62 68********.**********432...25*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 117 aa Download sequence |
MERDESAGKE TRYRGVRRRP WGKFAAEIRD SSRHGARVWL GTFSTAEEAA RAYDRAAYSM 60 RGSLAVLNFP DERHLYAADA SASSSRNETK KEVIELECLD DKVLEDLLDS GEEEKSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 1e-32 | ERF family protein |