PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020672114.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NF-YC | ||||||||
Protein Properties | Length: 111aa MW: 12214.2 Da PI: 8.4912 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 108.7 | 3.4e-34 | 18 | 98 | 19 | 98 |
NF-YC 19 helPlarikkilka.dedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 h+lPl+rikki+k+ edvkmis+eaP +++kacelfi elt r++ + + krrtl++ diaaavt td fdfl+++v XP_020672114.1 18 HSLPLSRIKKIMKQsGEDVKMISCEAPLVFAKACELFIEELTARAYKVTMQGKRRTLQREDIAAAVTATDLFDFLLEMVSA 98 89**********96269***********************************************************99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 111 aa Download sequence |
MRQAGIYSGI LCGKNGPHSL PLSRIKKIMK QSGEDVKMIS CEAPLVFAKA CELFIEELTA 60 RAYKVTMQGK RRTLQREDIA AAVTATDLFD FLLEMVSASV INDGRTTTES T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 9e-35 | NF-YC family protein |