PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020671816.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bZIP

Protein Properties

Length: 427aa MW: 47223.9 Da PI: 7.37

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020671816.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.7	1.6e-10	142	182	5	45
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L XP_020671816.1 142 KSLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQDL 182 788*************************9888888777666 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MERNSAHTSR FADFGAFEQP TGFRIEDAAR TNLFNSNSIG EFITSDHLQF GSFSKPAVAF 60 AHTTGSLPLQ QHKGQKANVG SLPSGFIDSW GESSIADASP RTDTSTDVDI EEKNQRLEQV 120 QSVAPVTSDS SDQSKGKTGD QKSLRRLAQN REAARKSRLR KKAYVQQLEN SRLKLTQLEQ 180 DLQRSRQQGI FISSAGDQSH SVNGNVALAF DMEYARWIEE HNRQLSELRA AVNSHASDNE 240 LRVIVDGIMA HYDEIFKLKG TAAKADVFHM LAGMWKTPAE RCFLWIGGFR SSELLKLLTS 300 QLEPLTEEQL VGICKLQQLS LQAEDALSQG MEALQQSLAE TIASGSPGSN GSSGNVANYM 360 GQMAMAMGKL GTLENFVSQA DNLRQRTLQQ LQHILTTRQS ARALLAINDY FSRLRALSSL 420 WLARPKE

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MERNSAHTSR FADFGAFEQP TGFRIEDAAR TNLFNSNSIG EFITSDHLQF GSFSKPAVAF  60
AHTTGSLPLQ QHKGQKANVG SLPSGFIDSW GESSIADASP RTDTSTDVDI EEKNQRLEQV  120
QSVAPVTSDS SDQSKGKTGD QKSLRRLAQN REAARKSRLR KKAYVQQLEN SRLKLTQLEQ  180
DLQRSRQQGI FISSAGDQSH SVNGNVALAF DMEYARWIEE HNRQLSELRA AVNSHASDNE  240
LRVIVDGIMA HYDEIFKLKG TAAKADVFHM LAGMWKTPAE RCFLWIGGFR SSELLKLLTS  300
QLEPLTEEQL VGICKLQQLS LQAEDALSQG MEALQQSLAE TIASGSPGSN GSSGNVANYM  360
GQMAMAMGKL GTLENFVSQA DNLRQRTLQQ LQHILTTRQS ARALLAINDY FSRLRALSSL  420
WLARPKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.1	1e-154	bZIP family protein