PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020671735.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB_related | ||||||||
Protein Properties | Length: 212aa MW: 24318.2 Da PI: 7.8924 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.2 | 1.6e-17 | 33 | 77 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 gr+T++E+ l+++++ ++G++ W++Iar+++ gRt++++k++w++++ XP_020671735.1 33 GRMTPQEERLILELHSEWGNR-WSRIARRLP-GRTDNEIKNYWRTHM 77 89*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MDRTGRPATG LNRTGKSCRL RWFNYLQPGL KHGRMTPQEE RLILELHSEW GNRWSRIARR 60 LPGRTDNEIK NYWRTHMRKK AQERKKNSSS SASTISTCLS THSASPLDAT TTKNEEDGSS 120 LITEKESREK EYAVNVYPME QIWNDIASLE SGGSSFAQCT VERCNLSCDP PPMTSPVQEH 180 FVDYLWMMDD NEFSKIATSN DFRFLTSGII ES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46130.3 | 4e-52 | MYB_related family protein |