PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID UNPLg00240.t1
Organism
Chromochloris zofingiensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
Family C2H2
Protein Properties Length: 325aa    MW: 37105.3 Da    PI: 6.5477
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
UNPLg00240.t1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.000136284123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   ++C+ C k + +++ L  H+r+H
  UNPLg00240.t1 62 FECEVCRKKCQSNHALAEHMRVH 84
                   89*******************99 PP
2zf-C2H212.60.0004190114123
                    EEET..TTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCp..dCgksFsrksnLkrHirtH 23 
                    y C+   Cg + +++++L+rH r+H
  UNPLg00240.t1  90 YACTfeCCGARLKTSDQLTRHVRLH 114
                    7899999****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MQQTKAAMIW AQSYVMLELD YKFIKHRNDK GHWTYLCTYT GCTQNFKELE KYEAHLNYHT  60
GFECEVCRKK CQSNHALAEH MRVHTDERPY ACTFECCGAR LKTSDQLTRH VRLHTGERPF  120
VCHYDGCEGK FVSCGELQVH IECNHTPEGQ ARRKKQEQRL AKALDAAGIS YKREHVVDIS  180
CVGDVDNQFA RVDFVIILHG CIIFIEVDED QHKFGGYGGV ACDMKRMSKI MESLALEGNT  240
LPIVFILYNP NAYTVDGGKT KKNKAEREAE LIALLQDADA ALYNSGRPCT IQYMYYDTWA  300
DQAEVVCDPA YNQMMRECCE AAII*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04240.13e-15C2H2 family protein