PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

UNPLg00160.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

bHLH

Protein Properties

Length: 645aa MW: 66683.7 Da PI: 6.8947

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
UNPLg00160.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.2	2.2e-11	113	158	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h ++E+rRR riN+++e Lr+++P+a ++ + a Le++++YI L UNPLg00160.t1 113 RHQAAEQRRRTRINERLELLRKVVPHA-----ERTNTACFLEEVINYIEAL 158 599*********************9.....8*************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 645 aa Download sequence
MQAMPTQGRQ ANLPAANLGA GLAVRYPGIA LLSQFGPLFA AGNQPNYSQL GQQLPHQHTT 60 HRRGSQQDTT DTTAPAGLAG ATAAADLEQE LANGSKGRTQ STDSRGSTAY ASRHQAAEQR 120 RRTRINERLE LLRKVVPHAE RTNTACFLEE VINYIEALRH RNSNLERQIA GIQAGAAGTE 180 QDEATADIAA HPPVAGSSPI ASGASAGSGR QFGLGTGAGD GMPSSGGLPA YSLTHSNHNG 240 KQYSPRSDQP VRNALHVAAD HQQDGINAPG AHLLQQPPLD HQAADGRQQQ QKEHDGANTS 300 HARQHDTAAT ASLLVNHGQR KRSRSPASSQ LPGSGHPGSS SYPPATHQPA ADGHAGWERM 360 EQLVAIAAAA ATTATDGGAQ VPTSVVPAIV TAVAGGAGQS PGKLNDMSTA GDQPVTAPTS 420 DIGSSFASGL LDHALRRLPH AASAHDTVTE VGGQGGWCQS NPGAGGGTQG VQGGNSQPHE 480 RVDESGVPVE HLQHAAHEPH QNKQLQQQLQ LRQEQHFDGR EDHCENSTAL LSTGPQGATS 540 TAQYQHDGIA EQKHYNIHIA PSTTTTTTSN APATSFDLRS HMPSTLYKLL QCASTPTSAA 600 ATAEGAAAAG NGSSNDHVGG AAAADESTSP DGAMPFKKRK VLLL*

Sequence ? help Back to Top

Protein Sequence Length: 645 aa Download sequence

MQAMPTQGRQ ANLPAANLGA GLAVRYPGIA LLSQFGPLFA AGNQPNYSQL GQQLPHQHTT  60
HRRGSQQDTT DTTAPAGLAG ATAAADLEQE LANGSKGRTQ STDSRGSTAY ASRHQAAEQR  120
RRTRINERLE LLRKVVPHAE RTNTACFLEE VINYIEALRH RNSNLERQIA GIQAGAAGTE  180
QDEATADIAA HPPVAGSSPI ASGASAGSGR QFGLGTGAGD GMPSSGGLPA YSLTHSNHNG  240
KQYSPRSDQP VRNALHVAAD HQQDGINAPG AHLLQQPPLD HQAADGRQQQ QKEHDGANTS  300
HARQHDTAAT ASLLVNHGQR KRSRSPASSQ LPGSGHPGSS SYPPATHQPA ADGHAGWERM  360
EQLVAIAAAA ATTATDGGAQ VPTSVVPAIV TAVAGGAGQS PGKLNDMSTA GDQPVTAPTS  420
DIGSSFASGL LDHALRRLPH AASAHDTVTE VGGQGGWCQS NPGAGGGTQG VQGGNSQPHE  480
RVDESGVPVE HLQHAAHEPH QNKQLQQQLQ LRQEQHFDGR EDHCENSTAL LSTGPQGATS  540
TAQYQHDGIA EQKHYNIHIA PSTTTTTTSN APATSFDLRS HMPSTLYKLL QCASTPTSAA  600
ATAEGAAAAG NGSSNDHVGG AAAADESTSP DGAMPFKKRK VLLL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	1e-11	bHLH family protein