PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz19g00290.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

Protein Properties

Length: 1333aa MW: 140814 Da PI: 7.0039

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz19g00290.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	39.3	1.2e-12	633	697	34	96
SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 34 ktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 +++++ d +g W v++ + +++ lt GW+eF ka++Lk gD+v+F++ g+++ l+v+ Cz19g00290.t1 633 REVRIVDVQGVHWPVQYEGvlCAAQRHLRLTCGWSEFIKAKKLKIGDSVTFERRGNNRHILLVSC 697 6899***********6566888889***********************8877666566655 PP

Sequence ? help Back to Top
Protein Sequence Length: 1333 aa Download sequence
MLPDILNLPE AAQGLHQPPD LDDSPGQHSQ AHEQVRLHER YAEEPPGKRH KGYSIHAYPA 60 AESDAVQASD VANDKCDQQE PAVPGQSSKL QPVNEAESAS IIEAGSSSNN ESGKGGVVDS 120 SAVSSPSSAE GVPDAFATIT AIPPAPGTAA AAAAVHALTL ALQENGKDHA TLQQWDNVSK 180 QTSSMMMAPI TCTVSVKADA EDGDIPTPTG TMVNDIMMAH FQPDLCRQSA DGANCEGLTT 240 HNVNSVARHV MGVDHVHGLD VDMAGFDLGQ AIKLNDQGLQ PQAIWSDDNN MGHRTPTTRA 300 FLQSVKSEQM TMPLIDHVAV QASAQLAQHQ QQQLQSMGSH PNAATTEMQA MAVHNSTQSA 360 HMYQHLPHGM QRHQIHSEGC HSLDMPAMAN SSMPGGYAIS SNAAAGKLNG AVANGRSMPA 420 AASSGLMLSG AGSPFVTQPA PRALHHGNTT TTREQAMWGN PSAASASAPM QQQSLQPPTH 480 MAAAAVARSA VMTPPVGAAV SASWQVDGTS TTSSTSTHVM PAVGLMPAVR PAGVVITGEM 540 PPLQAPPPGW QTTTSFPAGL DLASQNTGAT ARDTSGKEVE VLRHTRQISC KTYLKRLNVT 600 QFMSDNLLPQ VEGSARVPGQ TKMSKGYELL FKREVRIVDV QGVHWPVQYE GVLCAAQRHL 660 RLTCGWSEFI KAKKLKIGDS VTFERRGNNR HILLVSCHRQ GEPPEEMPLF IPGLPGVPAL 720 TKQPSSVGLD AGTAGSSDQF MSNDVSKSLL QQHLGNPSQY HQTQSSNVIR WAGPQMSNSS 780 LHEQKQHGMH MPVANMPPHG RPTLVNGSIM QSMTTHQPNP EAHPSHGHNY HAHRTSDPQL 840 MMSTASATQM QHQTAQLQHS AGDSMPGLTV MHQEHRYPVV NKLAPYAAQY QPAGHLQSAS 900 GLHQMSDASM AHMQYGYQSN GSTHLHSHRM GTSDAHQNHH HLPRSHSWAQ PGLGMGTTMS 960 SQGMNLGHTV GMTMVISNTG VSYQPSSSAY GSVSHHQQHH QQQQHQHNWA GQTSIDTPGL 1020 MSYSSGPLVG AGQGRDAPAA WQPSCNSTHN GADLAGHGSS GGAGMNMRMQ AQTAGQGGGP 1080 DVQPYPSPAT QQAKDVKNSS SPDQQDPPNV HTMLEQLHKL AKHRPDLLLS VVDNLMNTRA 1140 AKAHQQLTAQ KAAAAAAANG GQLQSQTSSG QPVTFAQKDQ QHQSKHLHPK QQQPGNGLQQ 1200 TQLQAGQAAV AADQKMLLPA DAMNIHDQAA TSVQSPAADA GVAHAAHLGK LLPTMPALNQ 1260 STATRLADQN PGLHPSVMQI LNPNPATQLP SACAGDLPCL ARQVAAATQL SNAASGSLSS 1320 SPGNSHEADQ LN*

Sequence ? help Back to Top

Protein Sequence Length: 1333 aa Download sequence

MLPDILNLPE AAQGLHQPPD LDDSPGQHSQ AHEQVRLHER YAEEPPGKRH KGYSIHAYPA  60
AESDAVQASD VANDKCDQQE PAVPGQSSKL QPVNEAESAS IIEAGSSSNN ESGKGGVVDS  120
SAVSSPSSAE GVPDAFATIT AIPPAPGTAA AAAAVHALTL ALQENGKDHA TLQQWDNVSK  180
QTSSMMMAPI TCTVSVKADA EDGDIPTPTG TMVNDIMMAH FQPDLCRQSA DGANCEGLTT  240
HNVNSVARHV MGVDHVHGLD VDMAGFDLGQ AIKLNDQGLQ PQAIWSDDNN MGHRTPTTRA  300
FLQSVKSEQM TMPLIDHVAV QASAQLAQHQ QQQLQSMGSH PNAATTEMQA MAVHNSTQSA  360
HMYQHLPHGM QRHQIHSEGC HSLDMPAMAN SSMPGGYAIS SNAAAGKLNG AVANGRSMPA  420
AASSGLMLSG AGSPFVTQPA PRALHHGNTT TTREQAMWGN PSAASASAPM QQQSLQPPTH  480
MAAAAVARSA VMTPPVGAAV SASWQVDGTS TTSSTSTHVM PAVGLMPAVR PAGVVITGEM  540
PPLQAPPPGW QTTTSFPAGL DLASQNTGAT ARDTSGKEVE VLRHTRQISC KTYLKRLNVT  600
QFMSDNLLPQ VEGSARVPGQ TKMSKGYELL FKREVRIVDV QGVHWPVQYE GVLCAAQRHL  660
RLTCGWSEFI KAKKLKIGDS VTFERRGNNR HILLVSCHRQ GEPPEEMPLF IPGLPGVPAL  720
TKQPSSVGLD AGTAGSSDQF MSNDVSKSLL QQHLGNPSQY HQTQSSNVIR WAGPQMSNSS  780
LHEQKQHGMH MPVANMPPHG RPTLVNGSIM QSMTTHQPNP EAHPSHGHNY HAHRTSDPQL  840
MMSTASATQM QHQTAQLQHS AGDSMPGLTV MHQEHRYPVV NKLAPYAAQY QPAGHLQSAS  900
GLHQMSDASM AHMQYGYQSN GSTHLHSHRM GTSDAHQNHH HLPRSHSWAQ PGLGMGTTMS  960
SQGMNLGHTV GMTMVISNTG VSYQPSSSAY GSVSHHQQHH QQQQHQHNWA GQTSIDTPGL  1020
MSYSSGPLVG AGQGRDAPAA WQPSCNSTHN GADLAGHGSS GGAGMNMRMQ AQTAGQGGGP  1080
DVQPYPSPAT QQAKDVKNSS SPDQQDPPNV HTMLEQLHKL AKHRPDLLLS VVDNLMNTRA  1140
AKAHQQLTAQ KAAAAAAANG GQLQSQTSSG QPVTFAQKDQ QHQSKHLHPK QQQPGNGLQQ  1200
TQLQAGQAAV AADQKMLLPA DAMNIHDQAA TSVQSPAADA GVAHAAHLGK LLPTMPALNQ  1260
STATRLADQN PGLHPSVMQI LNPNPATQLP SACAGDLPCL ARQVAAATQL SNAASGSLSS  1320
SPGNSHEADQ LN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	2e-06	ARF family protein