PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cz16g13050.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 768aa MW: 75454.3 Da PI: 7.1884 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 47.2 | 3.1e-15 | 336 | 368 | 1 | 33 |
GATA 1 CsnCgttkTplWRrgp.dgnktLCnaCGlyyrkk 33 C nCgt +Tp WR+++ dg++ LCnaCGly++k+ Cz16g13050.t1 336 CKNCGTRNTPFWRKDKnDGKP-LCNACGLYFAKN 368 ****************88999.*********996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 768 aa Download sequence |
MTDTSGHQDG AAALQHEERV GSIMDGPSQA GGTAGPSATE SEHARQGHQQ HQAMPEEQDE 60 VRSCAPPSST QHLASYACYY NSPYAAAGPP MSMPQAQAAT GGMPSTSSNV VTGTPLSEFA 120 TQWQMQQQQQ QAAMFWWWQM WMSSMYGGSM PSFSGNPQAM QDMFTSAGMM PGQMPGQMPG 180 QMPGQMSGQM LGQNPQYMWA MQSGMVPPPG APQMPGMPPP PVPMQAGVPN QLGPPGVPVQ 240 NPMSNMSQPA NLADGSGVAG PSSGRADGGT AATAANAGHH AADGAMSGGE GPADSGNIGG 300 SKRPRPDGTA DANGGSYQGN NQAKRGRKLV KEQKVCKNCG TRNTPFWRKD KNDGKPLCNA 360 CGLYFAKNDA QRPRVLWKES EGCDMKMPAA AGNGGTAGAK QPVTSQATAT SLPTPTTTAA 420 HAAAHQLTHM AAPGVMLLPA STGATAMAPM AMPDGSSFLP AAHTVPGLPA LNPLMHQHPR 480 LPGQLPGQVP PQHMMGLPGG KPAAAGVLPT LSHAWLTGSH MLSSAPMAAA AAAAAVAPPS 540 SVPVPGIAPQ GSAPVVLPST ATTLPPALLV QPLAATARQQ GTVAAAVATP AAKPSLQSTQ 600 PPAAATANAT AAPAVATSKG LGVDAATNGL AGAAAPVGEN AAPQPLSVHA ANAGGAGGNG 660 SSEVTVSGGG DTSSGAGVGS TGAGDGSTGG IIGSSGAPAG SNAAGVGSSG AAGCSAGGVV 720 GSSGAGQHIP GGGQAGSDSK ASHGPPMNGT SISASPMAAA PIRVDTT* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 302 | 306 | KRPRP |