PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz14g21250.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

AP2

Protein Properties

Length: 1998aa MW: 216927 Da PI: 6.3007

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz14g21250.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	44.7	3.3e-14	221	270	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV+ + ++grW+++I+ k+++lg f+t+e+Aa a++ a+ k++g Cz14g21250.t1 221 SKFRGVTHHIRTGRWESHIWQG-----GKQIYLGGFDTEEQAAMAYDIAAVKFRG 270 79***************993.....4**********************998 PP
2	AP2	35	3.6e-11	314	367	2	54
AP2 2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkle 54 y+GV+++ +g+W+A+I +g rk+ +lg ++t+ eAa a+++a+ + + Cz14g21250.t1 314 AYRGVTRHA-KGKWEARIGRAAGGGeqGRKYRYLGLYDTEIEAAMAYDRAAVAQK 367 69**998.7**988444558555******99*******97765 PP

Sequence ? help Back to Top
Protein Sequence Length: 1998 aa Download sequence
MEPCETADYS QLGEVPVINS NSAQDDVELS ELEPLQQLSP TKAIIQEHDN AQHGQHDVSH 60 HDKPQIHPGL CHDASSDAFM QCQSVAEDMR APITTSHQDS PLMRMSRGML SLNAAAAAAA 120 AAGDSNSAEN SVAGLNAAAD RLRGKPLTTP AVSNDPTYVA AALMATGIDG QEFNKGIFTV 180 SQQRAENAVP LAADDSAVHH ARDRAQAARK ALEKKGSRNT SKFRGVTHHI RTGRWESHIW 240 QGGKQIYLGG FDTEEQAAMA YDIAAVKFRG KKAQTNYNMC NYKDELSQRN RVSNEDLIAH 300 LRRISRGPSR SSSAYRGVTR HAKGKWEARI GRAAGGGEQG RKYRYLGLYD TEIEAAMAYD 360 RAAVAQKGLN AVTNFDLSLY LDMLDPADLE GFVHTQQAVV GATAAAEDAV DDVQAATAAD 420 SDVAVADNSM TETEQDDDSA TAVADAMVQR IRTFELGEPQ AEGSQQNNQN CMLQQGELLA 480 AMMDAVACAP NDQATQQAMT NPSATHKASY TSQPCDTTGQ HGAVPAVADD LPAVADLPAI 540 GPMYWETLEE QHMLQSSHQH QGRSSAKHTA VHMHNKQPLA GTATDHQPLE HASSVQGTFN 600 TLPHNHPNEP HPVMHSAREP DRLMSPPRPP PPHRHLPHEV TMPYAPTAGF WPQIGLTSPH 660 TLNPAEHHAL RNLSHQCMLS GFNTLSPVSP RVSDYHMYPE PPGSELFTAS GPGFMGSHAW 720 QPMRGSVMRT RTAPASFQWS HFLASHSVDA CQAHMMTGFH DQVISHRHST YQDHHVMLQP 780 PSLSRSITTN LAPLCAAAVN YPQMWTISNE HHHPHHDFIN EQSDEQGYQG HNKEQEMQHI 840 QPNRQLIADV HVPTDEQLSA DADMNTLMHD TATLGSNFID HASPADTATD AVAYDTPSVA 900 VGIVDDRQCG HQNQRQHLSQ RDVSDKKPEV RIVLVDATAG EAEDMDMEQG EHVQSLVNGL 960 QLQPVSQKPP PGQPLPMAAD TAVLMSCDPE PTKYLDVEHN TGVGNALSQH DMACDVNNIN 1020 NTDIAPTLSS DQPSARPDWK PLTTPMKHGT VARDKQFPIT GGANQLPPVV SSKQSVDAGP 1080 SLLHFGDRST DQSNKGVEGS EPDMLLGMPN GDNEHMHQSL LNGHMHQSLH ANKDQDSQPP 1140 GTPEVPLGQG QEVEHSKLLK EAENTHLPAS AGGHDHDCNA SLNASLRYMD PNPMQDPFGN 1200 MHATAPGIGD HRPSPLADEH NMPQPPLLVD VHDMLQPSWV SAGTQRQMQC TKHTPATLSR 1260 WRTAPEAAFS SLQDGLLHGM HGEEPAMQRP PPPGFGFHGS HPGFCRSEEA IVDVGSHAEW 1320 LWQQQQQHDT LATAIGASAW QLWLEVSAGK ALQGEHPDMD YPSLLSKPQG TYEMFTIPAI 1380 RPPYHIPRQF SLPATTASIQ SPATHMVLQQ QLSAQLQQNT AIDAGGFVVP PPSRSLSHVP 1440 HERPDANGTV TPVTCSQAHM PITSPCGHLS LPPAAPQTRQ PAADATITGT HVFTQGGPQE 1500 PHCEAEQLVP DMSAAEATGE TDVHGGCLTS QTVACQDDAF AAAQQQQQQQ QQQTAHATTI 1560 EIMRSVTMQA GDRTEPSMMQ YTGTAVNQAQ FRSTDVIESH YNTHWRHSAA HHKHLPPDYS 1620 RSTGLQQHVH PVAGMHHLHE PTLLAGQANV QRHQHANQSN LGSPQCQHQT GISMLLQNGK 1680 HTSSRRHVLP AQPSLIHTQN FEPLFNPMPW QPAHNIPSTP PSGNVIQPLA ADRWARQDNP 1740 SMQHTGRMHG GMPPEFSGRH HNVPFDANAL LQRHAITFRN SFPQQGMPLP DAWPDGHAQD 1800 MHTRHIQPQQ SKGLKRGRTH GGSQYNTHHR EELPGSNAGI LETRTLAEPG PAVITAGDVA 1860 GQTEPATDNT GVAKSATMHL HHIPIHDGHQ LPLQRSLTAP QQLLGGCTTA PPAPNGVVSN 1920 VVPDTSSNHG DATGEVSPST KRATPSAAAV LRSISDMTMD PTTRTMQLDI QHYETTLRSS 1980 ALHARVELSH QTQESFH*

Sequence ? help Back to Top

Protein Sequence Length: 1998 aa Download sequence

MEPCETADYS QLGEVPVINS NSAQDDVELS ELEPLQQLSP TKAIIQEHDN AQHGQHDVSH  60
HDKPQIHPGL CHDASSDAFM QCQSVAEDMR APITTSHQDS PLMRMSRGML SLNAAAAAAA  120
AAGDSNSAEN SVAGLNAAAD RLRGKPLTTP AVSNDPTYVA AALMATGIDG QEFNKGIFTV  180
SQQRAENAVP LAADDSAVHH ARDRAQAARK ALEKKGSRNT SKFRGVTHHI RTGRWESHIW  240
QGGKQIYLGG FDTEEQAAMA YDIAAVKFRG KKAQTNYNMC NYKDELSQRN RVSNEDLIAH  300
LRRISRGPSR SSSAYRGVTR HAKGKWEARI GRAAGGGEQG RKYRYLGLYD TEIEAAMAYD  360
RAAVAQKGLN AVTNFDLSLY LDMLDPADLE GFVHTQQAVV GATAAAEDAV DDVQAATAAD  420
SDVAVADNSM TETEQDDDSA TAVADAMVQR IRTFELGEPQ AEGSQQNNQN CMLQQGELLA  480
AMMDAVACAP NDQATQQAMT NPSATHKASY TSQPCDTTGQ HGAVPAVADD LPAVADLPAI  540
GPMYWETLEE QHMLQSSHQH QGRSSAKHTA VHMHNKQPLA GTATDHQPLE HASSVQGTFN  600
TLPHNHPNEP HPVMHSAREP DRLMSPPRPP PPHRHLPHEV TMPYAPTAGF WPQIGLTSPH  660
TLNPAEHHAL RNLSHQCMLS GFNTLSPVSP RVSDYHMYPE PPGSELFTAS GPGFMGSHAW  720
QPMRGSVMRT RTAPASFQWS HFLASHSVDA CQAHMMTGFH DQVISHRHST YQDHHVMLQP  780
PSLSRSITTN LAPLCAAAVN YPQMWTISNE HHHPHHDFIN EQSDEQGYQG HNKEQEMQHI  840
QPNRQLIADV HVPTDEQLSA DADMNTLMHD TATLGSNFID HASPADTATD AVAYDTPSVA  900
VGIVDDRQCG HQNQRQHLSQ RDVSDKKPEV RIVLVDATAG EAEDMDMEQG EHVQSLVNGL  960
QLQPVSQKPP PGQPLPMAAD TAVLMSCDPE PTKYLDVEHN TGVGNALSQH DMACDVNNIN  1020
NTDIAPTLSS DQPSARPDWK PLTTPMKHGT VARDKQFPIT GGANQLPPVV SSKQSVDAGP  1080
SLLHFGDRST DQSNKGVEGS EPDMLLGMPN GDNEHMHQSL LNGHMHQSLH ANKDQDSQPP  1140
GTPEVPLGQG QEVEHSKLLK EAENTHLPAS AGGHDHDCNA SLNASLRYMD PNPMQDPFGN  1200
MHATAPGIGD HRPSPLADEH NMPQPPLLVD VHDMLQPSWV SAGTQRQMQC TKHTPATLSR  1260
WRTAPEAAFS SLQDGLLHGM HGEEPAMQRP PPPGFGFHGS HPGFCRSEEA IVDVGSHAEW  1320
LWQQQQQHDT LATAIGASAW QLWLEVSAGK ALQGEHPDMD YPSLLSKPQG TYEMFTIPAI  1380
RPPYHIPRQF SLPATTASIQ SPATHMVLQQ QLSAQLQQNT AIDAGGFVVP PPSRSLSHVP  1440
HERPDANGTV TPVTCSQAHM PITSPCGHLS LPPAAPQTRQ PAADATITGT HVFTQGGPQE  1500
PHCEAEQLVP DMSAAEATGE TDVHGGCLTS QTVACQDDAF AAAQQQQQQQ QQQTAHATTI  1560
EIMRSVTMQA GDRTEPSMMQ YTGTAVNQAQ FRSTDVIESH YNTHWRHSAA HHKHLPPDYS  1620
RSTGLQQHVH PVAGMHHLHE PTLLAGQANV QRHQHANQSN LGSPQCQHQT GISMLLQNGK  1680
HTSSRRHVLP AQPSLIHTQN FEPLFNPMPW QPAHNIPSTP PSGNVIQPLA ADRWARQDNP  1740
SMQHTGRMHG GMPPEFSGRH HNVPFDANAL LQRHAITFRN SFPQQGMPLP DAWPDGHAQD  1800
MHTRHIQPQQ SKGLKRGRTH GGSQYNTHHR EELPGSNAGI LETRTLAEPG PAVITAGDVA  1860
GQTEPATDNT GVAKSATMHL HHIPIHDGHQ LPLQRSLTAP QQLLGGCTTA PPAPNGVVSN  1920
VVPDTSSNHG DATGEVSPST KRATPSAAAV LRSISDMTMD PTTRTMQLDI QHYETTLRSS  1980
ALHARVELSH QTQESFH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	5e-38	AP2 family protein