PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz14g11030.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

AP2

Protein Properties

Length: 718aa MW: 75891 Da PI: 9.69

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz14g11030.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	29.8	1.5e-09	57	106	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y GV w+ + +rW+A I++ + k++ lg+f + eA ka ++a++kl+g Cz14g11030.t1 57 SQYVGVIWHGRVNRWRAAIKH------NgKKIFLGNFTDESEAGKAFDKAALKLRG 106 78*****************......44******88***********98 PP
2	AP2	34.8	4e-11	315	364	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++kG++w + +++W++++ g +k+ +lg+f +e+Aa+a+++a+++ +g Cz14g11030.t1 315 RFKGITWQHDKKKWRSSLSM----GAKKKLHLGYFNNPEDAARAYDKAALQHFG 364 69***********99666....236********************98776 PP
3	AP2	33.3	1.2e-10	453	502	1	52
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 ++y GV + k+++W A++ dps+ k+k+++lg f+++eeAaka+++ + k Cz14g11030.t1 453 PHYMGVIYVMKQQKWKAQYPDPSD--KKKKIPLGMFDSPEEAAKAYDRHAIK 502 689999555569****999955..46*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 718 aa Download sequence
MHRCQSQMEP AIEPAHQQLD HNVSTVVAPI VQLPVLPAPS QPIQQGPTPG TTPGKSSQYV 60 GVIWHGRVNR WRAAIKHNGK KIFLGNFTDE SEAGKAFDKA ALKLRGLNAK TNFPLETYGD 120 IADLLAQGYE DIPAGRALGR PRKRLDGDDQ DGVVEDAPGM PLLKKSKGMY VIPQEAQENN 180 PALEAVRRAM AGVLEQPVQE FVDALPGSDQ ESVLRKSSKA LEWVRKHAGR AVKPEKGEEG 240 ADRPASSEPP ALVLGPDGQP LDPQPVPKKR GRPPNPDKPP RTSSGLNPDG TPKRRGRPPK 300 HYTPGTEDDP HGMRRFKGIT WQHDKKKWRS SLSMGAKKKL HLGYFNNPED AARAYDKAAL 360 QHFGANCHTN FPISDYMTPS QLLGAIATLD QLAAASAEEL GGSLVPGQLT PADVNKSDTP 420 RGRPRKDAVT DLTAGAGTSE SGGAGVSDLL ATPHYMGVIY VMKQQKWKAQ YPDPSDKKKK 480 IPLGMFDSPE EAAKAYDRHA IKTQGMTAKT NFPLTYYPEL SAAAGGSYNQ PVYLVSLPTG 540 SSATAGYTTT DFNAAQASGY YQQFANQAAT AGGGMRPGAT AWPVTSSAAI PAATSPGSAS 600 KKGGKKAGGS EAMVSQAAAA GTLPAAATAA QPYAQVTYLV PGAHPQSAGE YYAAAAAAQQ 660 GNGGYTTTSS AAPAGTAVYV TAPGYGVLAQ PGQQTAQAGQ PATNFSYQQW NQFYTSR*

Sequence ? help Back to Top

Protein Sequence Length: 718 aa Download sequence

MHRCQSQMEP AIEPAHQQLD HNVSTVVAPI VQLPVLPAPS QPIQQGPTPG TTPGKSSQYV  60
GVIWHGRVNR WRAAIKHNGK KIFLGNFTDE SEAGKAFDKA ALKLRGLNAK TNFPLETYGD  120
IADLLAQGYE DIPAGRALGR PRKRLDGDDQ DGVVEDAPGM PLLKKSKGMY VIPQEAQENN  180
PALEAVRRAM AGVLEQPVQE FVDALPGSDQ ESVLRKSSKA LEWVRKHAGR AVKPEKGEEG  240
ADRPASSEPP ALVLGPDGQP LDPQPVPKKR GRPPNPDKPP RTSSGLNPDG TPKRRGRPPK  300
HYTPGTEDDP HGMRRFKGIT WQHDKKKWRS SLSMGAKKKL HLGYFNNPED AARAYDKAAL  360
QHFGANCHTN FPISDYMTPS QLLGAIATLD QLAAASAEEL GGSLVPGQLT PADVNKSDTP  420
RGRPRKDAVT DLTAGAGTSE SGGAGVSDLL ATPHYMGVIY VMKQQKWKAQ YPDPSDKKKK  480
IPLGMFDSPE EAAKAYDRHA IKTQGMTAKT NFPLTYYPEL SAAAGGSYNQ PVYLVSLPTG  540
SSATAGYTTT DFNAAQASGY YQQFANQAAT AGGGMRPGAT AWPVTSSAAI PAATSPGSAS  600
KKGGKKAGGS EAMVSQAAAA GTLPAAATAA QPYAQVTYLV PGAHPQSAGE YYAAAAAAQQ  660
GNGGYTTTSS AAPAGTAVYV TAPGYGVLAQ PGQQTAQAGQ PATNFSYQQW NQFYTSR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	3e-12	AP2 family protein