PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz14g00040.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

MYB

Protein Properties

Length: 855aa MW: 91889.1 Da PI: 6.9936

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz14g00040.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.1	9.6e-14	14	59	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+WT+eEd+ll v +lG+++W+++a+ + R++k+c++rw++ Cz14g00040.t1 14 KGAWTPEEDKLLTSRVSKLGTKSWTSVASGVI-FRSAKSCRLRWHNQ 59 79****************************.**********96 PP
2	Myb_DNA-binding	35.3	2.6e-11	68	108	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++++E+ +v+a + ++ W++ a+ ++ gRt++ +k++w+ Cz14g00040.t1 68 PFSEWEQAVIVKAQDVHRNK-WAALAKLLP-GRTDNAVKNHWN 108 89****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 855 aa Download sequence
MDDDDPSVIA DSKKGAWTPE EDKLLTSRVS KLGTKSWTSV ASGVIFRSAK SCRLRWHNQL 60 NPNVRKAPFS EWEQAVIVKA QDVHRNKWAA LAKLLPGRTD NAVKNHWNAT LSRKLTSADE 120 KLHNRYLDNG VSLEWLLQHP DLDTLTTSPH HKAFKHGKVS HVSTKKSMKK NKHRAPKAAS 180 TAVMTDVRDT CTITSTKVKH QHLQPDTSVS TQATAAAGGC SGPCSWNSSS SSELDCVADS 240 SAVVAIASQQ QQLGRLTTSE SVTACTELPA VCDDVGMLHA TAIATAQLSS GHTVDHTTLL 300 VSPIAAASHQ ACDNVGTPPP LPDAAPGNDD INLDEVFDVL LNDLPDLKQD NTSQSDTSIT 360 IQRAYSSGCV NTWSDGTDRS PLPDDLRAYA YSSSSFVGAC DDGTASSWHA IDWNAMHTHV 420 PAVPVAPPAV AGKPIQPKAQ SNAGDQDTLM SVKCAPQHDD QPAPGGSAAT TMYHPLSLPF 480 PITMSAGPPG SLALPLDPIT PHHLPSYCMS SIIRPGRNGR LLSPAAYDMM MAAAARRPQP 540 GHVEHQGHQQ QHEDQPPPAC LNLPSPATLP AGHQADMALA SIPGNATSPC SRQVQEHPYT 600 HSSHMPCVMR GNIVQHGSSP NSSSSGSSWY HHRPHNEYNS SFHRSGSFHH DYAHSHYSHS 660 RHDLSGTNHP YHSNPCTVLG SQSPAKLSHA MSMPSSPMTT QPAHHHFPNQ TAGSETHGSV 720 VGGNSAYHRT LSCSSLSSSY HNSLTSVKQV GSMCGGDSPR LMSHGSAPVT PSRQSRMAHS 780 MSPAAGALRH TAMFESPGCH QHHLHERCML IPQYADYGGG LYQQQSYNQH ADELDGDLLL 840 EDLHEAEMYM LMEL*

Sequence ? help Back to Top

Protein Sequence Length: 855 aa Download sequence

MDDDDPSVIA DSKKGAWTPE EDKLLTSRVS KLGTKSWTSV ASGVIFRSAK SCRLRWHNQL  60
NPNVRKAPFS EWEQAVIVKA QDVHRNKWAA LAKLLPGRTD NAVKNHWNAT LSRKLTSADE  120
KLHNRYLDNG VSLEWLLQHP DLDTLTTSPH HKAFKHGKVS HVSTKKSMKK NKHRAPKAAS  180
TAVMTDVRDT CTITSTKVKH QHLQPDTSVS TQATAAAGGC SGPCSWNSSS SSELDCVADS  240
SAVVAIASQQ QQLGRLTTSE SVTACTELPA VCDDVGMLHA TAIATAQLSS GHTVDHTTLL  300
VSPIAAASHQ ACDNVGTPPP LPDAAPGNDD INLDEVFDVL LNDLPDLKQD NTSQSDTSIT  360
IQRAYSSGCV NTWSDGTDRS PLPDDLRAYA YSSSSFVGAC DDGTASSWHA IDWNAMHTHV  420
PAVPVAPPAV AGKPIQPKAQ SNAGDQDTLM SVKCAPQHDD QPAPGGSAAT TMYHPLSLPF  480
PITMSAGPPG SLALPLDPIT PHHLPSYCMS SIIRPGRNGR LLSPAAYDMM MAAAARRPQP  540
GHVEHQGHQQ QHEDQPPPAC LNLPSPATLP AGHQADMALA SIPGNATSPC SRQVQEHPYT  600
HSSHMPCVMR GNIVQHGSSP NSSSSGSSWY HHRPHNEYNS SFHRSGSFHH DYAHSHYSHS  660
RHDLSGTNHP YHSNPCTVLG SQSPAKLSHA MSMPSSPMTT QPAHHHFPNQ TAGSETHGSV  720
VGGNSAYHRT LSCSSLSSSY HNSLTSVKQV GSMCGGDSPR LMSHGSAPVT PSRQSRMAHS  780
MSPAAGALRH TAMFESPGCH QHHLHERCML IPQYADYGGG LYQQQSYNQH ADELDGDLLL  840
EDLHEAEMYM LMEL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	7e-35	MYB family protein