PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cz10g28030.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
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Family | NF-YC | ||||||||
Protein Properties | Length: 141aa MW: 15492.6 Da PI: 6.8015 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 57.4 | 3.3e-18 | 49 | 128 | 20 | 99 |
NF-YC 20 elPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 lP+arikk++ka+ dvk ++a+a l++++ elfi + rs h ++ +r l d+ +av + +fl divp++ Cz10g28030.t1 49 VLPFARIKKMIKAEGDVKAVAADANFLIARSAELFIELMVSRSAEHMNQERRALLAYKDVCTAVHEWAPLEFLKDIVPKK 128 69**********************************99999*************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence |
MAEVERRHAA QAGDREHASA DDEQQENISP KDQAPGPSTH REREAHGLVL PFARIKKMIK 60 AEGDVKAVAA DANFLIARSA ELFIELMVSR SAEHMNQERR ALLAYKDVCT AVHEWAPLEF 120 LKDIVPKKAT AAALLAQNKS * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 2e-14 | NF-YC family protein |