PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cz10g26190.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
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Family | GATA | ||||||||
Protein Properties | Length: 916aa MW: 96614 Da PI: 7.7288 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 33.2 | 7.2e-11 | 246 | 280 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgp.dgnktLCnaCGlyyrkkgl 35 C+nC +T+ WRr+ g + LCnaCG++ + kg+ Cz10g26190.t1 246 CANCSIRQTTAWRRDTaTGLY-LCNACGMFMKNKGR 280 ****************88888.***********996 PP | |||||||
2 | GATA | 45.8 | 8.5e-15 | 699 | 733 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nCgt +T+lWRr++ k LCnaCG+y + +g+ Cz10g26190.t1 699 CANCGTDSTSLWRRDKASDKPLCNACGIYLQNNGR 733 ****************88888********998875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 916 aa Download sequence |
MRVLLPGRQA LDIAKAFYEQ FKYTAAHECW RQLKEQAFQS ASLLIGYKQH KLKQRIITSA 60 ALDHDAAGRI NAVCTKFDRG TVDLRQLVEG LVAVCGPRAL VEAVDVEAAG INLDELTYAS 120 RMPWDKVYRL LNNDEQNMAC LLHNHIWPVL KEQGWTQADI EGRTTYCMPA TSADVVGKSF 180 DRPIEVMNYM RCVGLPVPAS AIKELRAAEA AGKIVDWVNS LSAPQPRIAP PRPSTPMSGP 240 GAIHMCANCS IRQTTAWRRD TATGLYLCNA CGMFMKNKGR HRTQELIDSE AQRVRHQHTH 300 CQNPNPEPSA GAAGPSCSQP ASPLAMGPAG LELCAAHGTL GALNRVAESA APGTSSACSG 360 PQRRTERQRQ PKRFSDEWVQ GEEPLLDNES RGPSPKRRRF TNNNDPEDGM PAVMDEAEMD 420 DVSQSAAVAG LIAIGADTEE ELSEFAAASG HLAIHDDAPC EVGAAAVLVG MSAGTDFSNP 480 PDAAGYDTPG EDSITSVRKS KKNVRSNTHR ATSRRATPSP APLAPVMVDL GAPSSPSPMP 540 QAARSPIPES PAPNASSRAG SPNPRAAGTG PAVGHTPPGK SRFAVEHYTK KDATASPTSA 600 APASSPLQPS LHAAVMPVLP VNNLSPYSPT GQVAAETTRP SSGVHAHRPS GDAGKSALGG 660 GGPGRSSPSG LGVNKSPLKR TSGPKSKKRS TNYVPGQTCA NCGTDSTSLW RRDKASDKPL 720 CNACGIYLQN NGRARPTNGL FTSVGKTGKT RIVHRTASRS VTKPSYAHVV ESATEYFNRQ 780 SSGEHGHQVP NITPLNTALG ATGQSATAAS PAASPLLGSS RTSAAPAPRV SMPGSATLPT 840 GLFMSSVPGL SGLPMGSVIT VPAGIFSQSP PRQVRQQAFD DCDDCDDYDY GDDDYGHDDD 900 GPCDMDSDDG EGSRH* |