PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cz10g24060.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
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Family | NF-YB | ||||||||
Protein Properties | Length: 149aa MW: 16164 Da PI: 4.5704 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 36.4 | 1.2e-11 | 10 | 65 | 40 | 95 |
NF-YB 40 sefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 efi +v+se+++ + +e ++ti+++ ++ al +lGf d+v+++kv +++e + Cz10g24060.t1 10 KEFIQLVSSESNEVATKEVKNTISPEHVIRALEELGFSDFVDEVKVAWDQFKEESK 65 69********************************************9999998655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence |
MEDTEVSLPK EFIQLVSSES NEVATKEVKN TISPEHVIRA LEELGFSDFV DEVKVAWDQF 60 KEESKHTTKL AGRKTKAEEE GLTEAEQIAL QQQLFAAARA RSQSLDAAAA ATVAAAYNQA 120 TGQGAPVALQ PSVNSKPVKQ EVKQEEQH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08190.2 | 2e-17 | NF-YB family protein |