PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cz09g09270.t1
Organism
Chromochloris zofingiensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
Family NF-YC
Protein Properties Length: 272aa    MW: 29544.6 Da    PI: 4.8711
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cz09g09270.t1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC167.41.8e-52681751101
          NF-YC   1 qlksfwekq.......iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdif 89 
                    ql++fwe q        ++ ++fknh+lPlarikki+k+dedv+misaeaPvl++kace+fileltlrsw+haeenkrrtl+++diaaa+t+tdif
  Cz09g09270.t1  68 QLRTFWEGQkqevsqvGGDPAEFKNHQLPLARIKKIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWIHAEENKRRTLQRNDIAAAITKTDIF 163
                    799***9885554443334578************************************************************************** PP

          NF-YC  90 dflvdivprdel 101
                    dflvdivprde+
  Cz09g09270.t1 164 DFLVDIVPRDEQ 175
                    *********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MADPNGAGLA PPAAAAAPSV PNSQPSYQVQ QPYPAAAAFP AAQQYAQPYP QYQQPPQQQP  60
LAHPYADQLR TFWEGQKQEV SQVGGDPAEF KNHQLPLARI KKIMKSDEDV RMISAEAPVL  120
FAKACEMFIL ELTLRSWIHA EENKRRTLQR NDIAAAITKT DIFDFLVDIV PRDEQTKPEG  180
PEPAGVQPRP PGAVPPTPVN PGMYYPYPGM PGPVSAPEHM MAALPSMPMD PALMYQQSAA  240
YMGMAGQQWP QPQMQAAIPG QPPPSDASSQ Q*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1145151RRTLQRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48590.12e-58NF-YC family protein