PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cz08g00080.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
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Family | GATA | ||||||||
Protein Properties | Length: 342aa MW: 36317.6 Da PI: 6.0762 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 51.2 | 1.7e-16 | 271 | 305 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t++p+WRrgp+ ++ LCnaCG +yr++++ Cz08g00080.t1 271 CDHCGVTESPQWRRGPQHKPILCNACGTRYRRTNQ 305 9***************88888**********9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 342 aa Download sequence |
MAPTPEAVIT LPASMKDAVA FNRSVRSVTD KQRTLGALQH DVSVGHHQLK HSPAGQLRPS 60 YDGSLSSSCF DLDSLDQEPS SKGFISLDDF PYHDTSCLKT TPDATALVMP DLHEAYCDAL 120 LCRKDTGSAN MLLPGNFSPL MDSRQSPDSR LYTLVLLDDV TGDPLRPATD EDADEVARLM 180 SSADTGSSIM SSGAADSWPA FHVAGEDDLE EDSKQVVDNN LTIKQEHTAG AGADECAGGA 240 GVDGPSAFLV PAIPGVPAVP RPFHHKGGGP CDHCGVTESP QWRRGPQHKP ILCNACGTRY 300 RRTNQLGPPI PSSGKPACNK KRAISKTCDS SKVSKQLKMS R* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17570.1 | 2e-12 | GATA family protein |