PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cz08g00050.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
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Family | ARR-B | ||||||||
Protein Properties | Length: 524aa MW: 54618.2 Da PI: 6.7682 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 91.8 | 5.7e-29 | 115 | 168 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ e+H++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl Cz08g00050.t1 115 KPRVVWSVEMHQQFVQAVNQL-GIDKAVPKKILELMNVDGLTRENVASHLQKYRL 168 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 36.5 | 1.2e-11 | 117 | 167 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e ++++v+av+qlG + +k+I + m+ g+t++++ s++qky+ Cz08g00050.t1 117 RVVWSVEMHQQFVQAVNQLGIDkaVPKKILELMNvDGLTRENVASHLQKYR 167 678***********************************************7 PP | |||||||
3 | Response_reg | 27 | 2.2e-10 | 1 | 53 | 56 | 109 |
SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 56 mdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 mdG++ll++ e +lp+i+++++ge +++ + + Ga dfl Kp+ +eel++ Cz08g00050.t1 1 MDGFKLLETVGLE-LDLPVIMMSSNGEHTTVMRGVTHGACDFLIKPVRIEELRN 53 8999999999543.37************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 524 aa Download sequence |
MDGFKLLETV GLELDLPVIM MSSNGEHTTV MRGVTHGACD FLIKPVRIEE LRNIWQHVIR 60 RTRHPVFRDL EPDDHEGGDY EASKKRKDLY RGENSSGSGG AGGLERDDDG SASKKPRVVW 120 SVEMHQQFVQ AVNQLGIDKA VPKKILELMN VDGLTRENVA SHLQKYRLYL KRVQGVQAPF 180 GLPNIQLPRQ TSSKGAGSSS QQQHHQQQQH QQQHQHQHQT ALGTGQQQSH QLQPCPVSTA 240 TPVMPSPDAM VAASMMSSQA MAAMAPGVMN PMTAMNSMMA GLNPNMMGMA AGLGLAGLGI 300 GGMAGHPVPN PMLAGMGPMG LGLPPPPGMP PPPPGMPPGM PPGMPPGMPA MMQGLSMAGM 360 SHLAAAGMRP PPGALGGHLG GPGLSPFGPP PPPGADPANM MANMSSMMAN MQAALAFQAD 420 AAAAAQHQAA STGSVAPGRQ QQVHQHQQAV GMAVDDAAAF PSPGCRPNGS ADAGAQSAAE 480 PNDFSRVFDD PFAQPAASPS GAAAAGSNEA PGMDDFLDFF LKS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 3e-62 | ARR-B family protein |