PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz07g29070.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

GATA

Protein Properties

Length: 600aa MW: 65854.2 Da PI: 8.019

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz07g29070.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	36.4	7e-12	118	152	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nCg t+T+ WRr +d +Cn+CG yy+++g+ Cz07g29070.t1 118 CTNCGITTTSAWRRTKDIRALVCNSCGDYYKRNGR 152 ********************************986 PP
2	GATA	44.1	2.7e-14	207	239	1	34
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 CsnC++ Tp WRr+ g LCnaCGlyyr g Cz07g29070.t1 207 CSNCKSRITPTWRRDDGGAL-LCNACGLYYRNVG 239 ******************.********876 PP

Sequence ? help Back to Top
Protein Sequence Length: 600 aa Download sequence
MRLKAAQCLS RYQVADPPPG PCADGLMVTV DRIECATQYA CLDTFDSEDG MLMAQPQAQH 60 STGWWMYEYP PANGKTNHVT MVNAEPISKP QASYACHEPA PTQTAMVTTQ NTKGIKACTN 120 CGITTTSAWR RTKDIRALVC NSCGDYYKRN GRHRRVKNVA AAQPLPAEQP QQQQVQQPPP 180 QQKQVQGRRT TGPLEQPTVL EALAKACSNC KSRITPTWRR DDGGALLCNA CGLYYRNVGR 240 PRPIHPAPQP EDTAGQQQGK NQQKPATSVQ HIRDKEGVPR QPASKKHRAS KAQNGVIPTD 300 KAASATRLEA HTGDPASAGS CDTSCISLKL NNTGSSSGKL QPPAWEKLKR NVYVSRPAVI 360 QPDDEVPVCC CDASMGQRCR EQDRCLNRLL HVQCTPGYCP ARDACENQVI IKRQRPATKL 420 SFLGDKGWGL VAAQDIPAGT FIAEYTGEVV PCAEGMSRLE QYQAEGLRHT YVMNLNSSEV 480 IDATRRGGIA RFINHSCGPN CETQKWQVRG ELCVCIFTIA DINKDEEITY DYRYESAISS 540 RTKCSCGSAK CTGWLGTTTS ATDACEEDKK DTLFRKVISK VDHDGEVYTV DELDTFDSD*

Sequence ? help Back to Top

Protein Sequence Length: 600 aa Download sequence

MRLKAAQCLS RYQVADPPPG PCADGLMVTV DRIECATQYA CLDTFDSEDG MLMAQPQAQH  60
STGWWMYEYP PANGKTNHVT MVNAEPISKP QASYACHEPA PTQTAMVTTQ NTKGIKACTN  120
CGITTTSAWR RTKDIRALVC NSCGDYYKRN GRHRRVKNVA AAQPLPAEQP QQQQVQQPPP  180
QQKQVQGRRT TGPLEQPTVL EALAKACSNC KSRITPTWRR DDGGALLCNA CGLYYRNVGR  240
PRPIHPAPQP EDTAGQQQGK NQQKPATSVQ HIRDKEGVPR QPASKKHRAS KAQNGVIPTD  300
KAASATRLEA HTGDPASAGS CDTSCISLKL NNTGSSSGKL QPPAWEKLKR NVYVSRPAVI  360
QPDDEVPVCC CDASMGQRCR EQDRCLNRLL HVQCTPGYCP ARDACENQVI IKRQRPATKL  420
SFLGDKGWGL VAAQDIPAGT FIAEYTGEVV PCAEGMSRLE QYQAEGLRHT YVMNLNSSEV  480
IDATRRGGIA RFINHSCGPN CETQKWQVRG ELCVCIFTIA DINKDEEITY DYRYESAISS  540
RTKCSCGSAK CTGWLGTTTS ATDACEEDKK DTLFRKVISK VDHDGEVYTV DELDTFDSD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45170.1	1e-05	GATA family protein