PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cz06g25010.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
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Family | GATA | ||||||||
Protein Properties | Length: 481aa MW: 51896.2 Da PI: 5.3362 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 51.7 | 1.2e-16 | 444 | 475 | 1 | 32 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrk 32 C++Cgt +Tp WR gp g+ktLCnaCG++y k Cz06g25010.t1 444 CTQCGTQSTPVWRAGPHGPKTLCNACGVRYMK 475 *****************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 481 aa Download sequence |
MALEVMRGTS FALYSQFGDR FGGRFHCGCE SLKHLAGNAR EPSEAFQLLP ALSDEMSDPI 60 PCFASELEKE VAELEEEARR DCDFDFNFGL NDDTYKSTAT CQWLGDDTVS LDQRDSSSEH 120 SGVLPSLLPE VVDAIRANAE LVISTGETLK PGAWKGCSKS AECDREDRHR GLCNHRATIP 180 GPMAVAYASQ QLPVDSLTDS FTEQQDEVDK DDTDSVHAET SMEESLSGGH SYNQRPKLED 240 EREVASALKA VTVDDLLPAE RDQLPFRPTA RPALPADRCR VEPIWIQSGN SLSSDQDQYD 300 VSPVYSMDQG APAPLLTVTV PSIHHQPLGS GSSGSPAASM AALQIAPIDF RPLPREQMVN 360 NSLSLPPSSP TAAATSSLPA PMLRPVKPLH LDVHPDVFNM PKLPRVLNKS SKPVSKPSLD 420 GAGSPRGKKR TAGRIAANPN GHCCTQCGTQ STPVWRAGPH GPKTLCNACG VRYMKVAKKK 480 * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26930.1 | 6e-12 | GATA family protein |