PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cz06g16250.t1
Organism
Chromochloris zofingiensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
Family C3H
Protein Properties Length: 528aa    MW: 56175.5 Da    PI: 6.6306
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cz06g16250.t1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.91.3e-0675881427
                   --TTTTT-SS-SSS CS
        zf-CCCH 14 tCkyGdrCkFaHgp 27
                    C++Gd+C+FaH++
  Cz06g16250.t1 75 VCPRGDQCPFAHSM 88
                   5***********95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 528 aa     Download sequence    
MEAQQCGQVS TRSYSDEYSD EFFIYSYKVV TCPKWHTHDW RTCPFAHKVE SASRRDPKKH  60
TYLSVCCPES KAKQVCPRGD QCPFAHSMFE YWLHPSSLQE LRTPSYPALT PEQLQALTTS  120
QAALAARNAN DDDLTAAMAH IRKAGGAKVT DMYDGCLWST GVEGLAPPEH VVDMMGLWGG  180
AKAAAHPLSA RSACNIDAEA IKNAGLRKVG AATLAAANGG MMLRPSTPMT DSDGMHSSWS  240
EAGGLLGMAH TNHTVPASAS HPVAATVELL EGQHVPVAAS FAVQAASALP RLSWVAPVAS  300
KALRSYSSSD DSENIMISMP QLTCMPHMQP QASSFRHESH APSMLTGKAA ARWQPATSLG  360
STAAAMMGAI SSHSLGRVVP AVFNTVNGGP QVWNRAFAAD SHLSAIPVAS HLPTQQYTHT  420
SNPNALMAAA GPNMLAQSMP LIMPQAGMHM ASPHPYVINV SDDMLLTSLR FNGVQPPVHH  480
DSFMSCTYNL SSEGTLSAGM TTGDEGTDEV DLAAAGMNVM HLTGYFE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07500.19e-27C3H family protein