PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cz06g09230.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
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Family | AP2 | ||||||||
Protein Properties | Length: 1216aa MW: 124461 Da PI: 6.5258 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.1 | 1.6e-11 | 803 | 854 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+ykGV+w++ +WvA ++d ++ ++g++ ++e Aaka+++ ++k+ g Cz06g09230.t1 803 SQYKGVSWNSACSKWVAVLWD----ReLKRARHIGSYESEEAAAKAYDKEALKMLG 854 78*******************....3344888*********************987 PP | |||||||
2 | AP2 | 39.1 | 1.9e-12 | 888 | 937 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+w+++++rW+++ ++ g + ++ +g+f + eAa+a+++a ++l+g Cz06g09230.t1 888 SSYRGVSWHERSQRWEVR--VW---G-SgRQRFIGSFQQEIEAARAYDRAVLRLRG 937 67**************66..65...2.3488899*****99*************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1216 aa Download sequence |
MASSIPAMQQ VKPEQQPTDL TTAAASLQPM AATDIAPSSF DAPAVVQPLG ISTDSLPPVT 60 NAGEDSAAAV DSSAGERRVS DSGVQVARKG RVLTINGPLP SPLQQKIRQR HSNGHLPDED 120 SAAEDDGADA DAGYAGPTAH IVQAPVEMYA TGGSSQPAAV LLPTSSSQPL ASLASAVPQA 180 GALQALPATA VPQSSMQPAA ASAHHPISTA NTGSVAPFAP AAAAPVPEAT TAPAAVAPPH 240 AAMLQPVALS QQVPAVPAVL SAAAPGAPAL SAGDSSHATS PAAVAPPGSN QAAAGTSAEL 300 QLGAVAAAPA ATDLSGMLGS SMMVTPGGAQ VGQSSLTATA ATAAPVFRSV HYDKDRNRWQ 360 VLAWDGGQYR IIGEYNNENE ALLAQQPMIT THDVMRQTTI PAAATPAAAA TAAGSTVTST 420 ATAAPVAAVP GIQLLPAAQA ISHHHMATSP AVVTPHNQAQ LQEYFARLSA AHAHLSHQAA 480 LAAQAQAHAQ GHNGLAMHPS SAAAAATAAA TLPSSMFGSI AAGNHAASSA AMVDAHNAAQ 540 NAATSAGLMA HGQALGGINF GLAPGLAYGA PTVMGMTHRQ LVLPPDRTPG TFHGVHHLTT 600 ERKYQAFIMD HATAQPVWLD KYDTEEQAAH AHDREAIKRY GVHTELNFPR MYAAHFTTSF 660 TSGAMMPPQL GGPSVITDMQ QQLARSAEGG MTAGMPGSSM NASAGATAGL VSPVVSKFKG 720 VVWDPINIKW QAQAADLAGN VVLLGLYDTQ EDAAKEYDTR LIQSGCRDSK QLNYSLSKYK 780 HLLSGDAAST GGGGRASGPK VQSQYKGVSW NSACSKWVAV LWDRELKRAR HIGSYESEEA 840 AAKAYDKEAL KMLGPQNAGL NFRESLQEYM EANGMDASDA PTINKGSSSY RGVSWHERSQ 900 RWEVRVWGSG RQRFIGSFQQ EIEAARAYDR AVLRLRGQDA RSRSRMNFPI GDYNLDEIAA 960 EAAALAAAEA AGTIKQRAKR QRKPKPEPGV NTATAAAAPG VQPDSAVLML DATAVHASAG 1020 HMTVPSAAAQ DEYQLQHNVP TALPSTVPAG AMALTTAAAP PLIAMGTVDT ADASVNPAAS 1080 IKQDSLPEQQ IGPPTKKPKL LYDSGTTHVS PHQQGQADEH QHCQHHYHHH QHHDVETSAQ 1140 STGPYEDAGN SAGGLNSAAA AGSGVDASTF GACSAGVNNM LRQGGAYDGG GDNTGGVEDG 1200 GAASGGGGGN HSDIK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G39250.1 | 1e-13 | AP2 family protein |