PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cz06g09230.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
Family AP2
Protein Properties Length: 1216aa    MW: 124461 Da    PI: 6.5258
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cz06g09230.t1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.11.6e-11803854155
            AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                    s+ykGV+w++   +WvA ++d       ++  ++g++ ++e Aaka+++ ++k+ g
  Cz06g09230.t1 803 SQYKGVSWNSACSKWVAVLWD----ReLKRARHIGSYESEEAAAKAYDKEALKMLG 854
                    78*******************....3344888*********************987 PP

2AP239.11.9e-12888937155
            AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                    s y+GV+w+++++rW+++  ++   g + ++  +g+f  + eAa+a+++a ++l+g
  Cz06g09230.t1 888 SSYRGVSWHERSQRWEVR--VW---G-SgRQRFIGSFQQEIEAARAYDRAVLRLRG 937
                    67**************66..65...2.3488899*****99*************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1216 aa     Download sequence    
MASSIPAMQQ VKPEQQPTDL TTAAASLQPM AATDIAPSSF DAPAVVQPLG ISTDSLPPVT  60
NAGEDSAAAV DSSAGERRVS DSGVQVARKG RVLTINGPLP SPLQQKIRQR HSNGHLPDED  120
SAAEDDGADA DAGYAGPTAH IVQAPVEMYA TGGSSQPAAV LLPTSSSQPL ASLASAVPQA  180
GALQALPATA VPQSSMQPAA ASAHHPISTA NTGSVAPFAP AAAAPVPEAT TAPAAVAPPH  240
AAMLQPVALS QQVPAVPAVL SAAAPGAPAL SAGDSSHATS PAAVAPPGSN QAAAGTSAEL  300
QLGAVAAAPA ATDLSGMLGS SMMVTPGGAQ VGQSSLTATA ATAAPVFRSV HYDKDRNRWQ  360
VLAWDGGQYR IIGEYNNENE ALLAQQPMIT THDVMRQTTI PAAATPAAAA TAAGSTVTST  420
ATAAPVAAVP GIQLLPAAQA ISHHHMATSP AVVTPHNQAQ LQEYFARLSA AHAHLSHQAA  480
LAAQAQAHAQ GHNGLAMHPS SAAAAATAAA TLPSSMFGSI AAGNHAASSA AMVDAHNAAQ  540
NAATSAGLMA HGQALGGINF GLAPGLAYGA PTVMGMTHRQ LVLPPDRTPG TFHGVHHLTT  600
ERKYQAFIMD HATAQPVWLD KYDTEEQAAH AHDREAIKRY GVHTELNFPR MYAAHFTTSF  660
TSGAMMPPQL GGPSVITDMQ QQLARSAEGG MTAGMPGSSM NASAGATAGL VSPVVSKFKG  720
VVWDPINIKW QAQAADLAGN VVLLGLYDTQ EDAAKEYDTR LIQSGCRDSK QLNYSLSKYK  780
HLLSGDAAST GGGGRASGPK VQSQYKGVSW NSACSKWVAV LWDRELKRAR HIGSYESEEA  840
AAKAYDKEAL KMLGPQNAGL NFRESLQEYM EANGMDASDA PTINKGSSSY RGVSWHERSQ  900
RWEVRVWGSG RQRFIGSFQQ EIEAARAYDR AVLRLRGQDA RSRSRMNFPI GDYNLDEIAA  960
EAAALAAAEA AGTIKQRAKR QRKPKPEPGV NTATAAAAPG VQPDSAVLML DATAVHASAG  1020
HMTVPSAAAQ DEYQLQHNVP TALPSTVPAG AMALTTAAAP PLIAMGTVDT ADASVNPAAS  1080
IKQDSLPEQQ IGPPTKKPKL LYDSGTTHVS PHQQGQADEH QHCQHHYHHH QHHDVETSAQ  1140
STGPYEDAGN SAGGLNSAAA AGSGVDASTF GACSAGVNNM LRQGGAYDGG GDNTGGVEDG  1200
GAASGGGGGN HSDIK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G39250.11e-13AP2 family protein