PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz06g09120.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

MYB

Protein Properties

Length: 591aa MW: 63352 Da PI: 8.4048

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz06g09120.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.2	3.9e-18	62	107	3	48
SS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rW+++E+++l ++v+ +G++ +W+tIa ++ gRt+kqc++rw+++l Cz06g09120.t1 62 RWSEDEHKKLEKLVQTYGTDrNWSTIAGHLS-GRTGKQCRERWLNHL 107 8****************************.***********97 PP
2	Myb_DNA-binding	27.9	5.6e-09	113	155	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +g W+ E+ l ++ + G++ W++ ar+++ gRt++++k++w+ Cz06g09120.t1 113 KGGWSNVEEFVLSLCHSLVGSH-WSKMARRLQ-GRTENSIKNFWN 155 678*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
MRRAAQTALQ VFRDEYDSDV EEDTASEDSA GCSDLSEVST TITRRRRAAS GRSRGKQRTL 60 HRWSEDEHKK LEKLVQTYGT DRNWSTIAGH LSGRTGKQCR ERWLNHLRPG IRKGGWSNVE 120 EFVLSLCHSL VGSHWSKMAR RLQGRTENSI KNFWNATFRS KSANKKNGIL WTYISTIKEY 180 PNDPQTAFIT TVQKLVQEGE LPAEVESHIY TDYKVSNVLD AEQWRAVFVS EAEYLQGPAP 240 LDGDSSPVST PIRSPHSSLN PIKTPMLTPK SMTTTMGSSV LPALAPPTPQ SLGAAKGSGT 300 PTTPLNGEMT LSPVRIGPGL TPLKRKPITP TAAATGSPSL SHHSDTSHHP IPGNSHHVQG 360 CSCPQCFLST GTTDCHTPEG PKRMKVGPFA PSPLGQTDGA YSTAGGASKA MMSYNMPAPH 420 HHHSFQSVPT WGPVPPVNYH AHQAFTGNLP AARAHAMFGA PPKRASVPSL SDLMFGLGAA 480 TDAAKSGPGG MSNFNAACAS VSSAVDAMLS SSVPARADSL SEDVLDMLDY FKTDMAGLGV 540 DSLFANRLET LSRAASLSVD GAAAHLALAH SMGSKNSEVT AELLDYFTNN *

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

MRRAAQTALQ VFRDEYDSDV EEDTASEDSA GCSDLSEVST TITRRRRAAS GRSRGKQRTL  60
HRWSEDEHKK LEKLVQTYGT DRNWSTIAGH LSGRTGKQCR ERWLNHLRPG IRKGGWSNVE  120
EFVLSLCHSL VGSHWSKMAR RLQGRTENSI KNFWNATFRS KSANKKNGIL WTYISTIKEY  180
PNDPQTAFIT TVQKLVQEGE LPAEVESHIY TDYKVSNVLD AEQWRAVFVS EAEYLQGPAP  240
LDGDSSPVST PIRSPHSSLN PIKTPMLTPK SMTTTMGSSV LPALAPPTPQ SLGAAKGSGT  300
PTTPLNGEMT LSPVRIGPGL TPLKRKPITP TAAATGSPSL SHHSDTSHHP IPGNSHHVQG  360
CSCPQCFLST GTTDCHTPEG PKRMKVGPFA PSPLGQTDGA YSTAGGASKA MMSYNMPAPH  420
HHHSFQSVPT WGPVPPVNYH AHQAFTGNLP AARAHAMFGA PPKRASVPSL SDLMFGLGAA  480
TDAAKSGPGG MSNFNAACAS VSSAVDAMLS SSVPARADSL SEDVLDMLDY FKTDMAGLGV  540
DSLFANRLET LSRAASLSVD GAAAHLALAH SMGSKNSEVT AELLDYFTNN *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11050.1	7e-32	MYB family protein