PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cz05g21210.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
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Family | B3 | ||||||||
Protein Properties | Length: 247aa MW: 26809 Da PI: 5.459 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 54.4 | 2.2e-17 | 24 | 115 | 1 | 91 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k+lt+sdv++sgr+v+pk ae++ ++++++++++ +ed sg+++++++++ +++s++y+l+ G+ + ++ +L+ gD+++F ++++++ Cz05g21210.t1 24 FEKQLTSSDVSASGRVVVPKAVAEQYfpKIDSATGTEIDVEDASGNTYTLRFRFwiNNQSRMYLLE-GTADLQHQYHLRMGDVLIFA--QKEDQT 115 99**************************999999******************99666666667666.*******************9..334443 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MSDNEAKAEA MLKALEDIGA KVFFEKQLTS SDVSASGRVV VPKAVAEQYF PKIDSATGTE 60 IDVEDASGNT YTLRFRFWIN NQSRMYLLEG TADLQHQYHL RMGDVLIFAQ KEDQTIVLAG 120 RPSTKSDAAK KPPIRKPSPT PAGTRPASGR RETLPRATKD RSTRRRLRAY GLNAEDIEAP 180 ADGVFRAVPA AGLSDQPSAV SAVRDARWVA SLNLAGELYQ AFFDNEDDAL EAFNAAGFEQ 240 PVAAAT* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32010.1 | 6e-21 | B3 family protein |